From 25e89ceaef84ba498e9d502b9a072ec1c96fbb8a Mon Sep 17 00:00:00 2001 From: Yasemin Bridges Date: Tue, 12 Nov 2024 14:58:40 +0000 Subject: [PATCH 1/2] fix `sep` to `separator` for polars --- src/phenotype2phenopacket/utils/utils.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/phenotype2phenopacket/utils/utils.py b/src/phenotype2phenopacket/utils/utils.py index 0b5a34a..4890f50 100644 --- a/src/phenotype2phenopacket/utils/utils.py +++ b/src/phenotype2phenopacket/utils/utils.py @@ -36,7 +36,7 @@ def read_genes_to_disease(genes_to_disease: Path) -> pl.DataFrame: Returns: pl.DataFrame: A Polars DataFrame containing the contents of the genes_to_disease.txt. """ - return pl.read_csv(genes_to_disease, sep="\t") + return pl.read_csv(genes_to_disease, separator="\t") def load_ontology(local_cached_ontology: Path = None): From 4301e6ab9ccdeaebc259ef2656ae86d6164c9f86 Mon Sep 17 00:00:00 2001 From: Yasemin Bridges Date: Tue, 12 Nov 2024 14:58:51 +0000 Subject: [PATCH 2/2] bump version --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 8e5aff1..b7c03cf 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "phenotype2phenopacket" -version = "0.6.1" +version = "0.6.2" description = "" authors = ["Yasemin Bridges "] readme = "README.md"