You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hi:
I have followed your installation process. Environment includes python3.8, zlib1.2.12, cmake3.19.1, and g++10.2.0. Then I encountered the following problems during execution of ./install. Have you ever encountered them during your development?
"g++ -o bmean.o -c bmean.cpp -O3 -std=c++11 -lpthread -Ispoa/include -Ispoa/include/ -Lspoa/build/lib/ -lspoa
bmean.cpp: In function ‘std::vector<std::__cxx11::basic_string > consensus_SPOA(std::vector<std::__cxx11::basic_string >&, unsigned int, std::string)’:
bmean.cpp:586:32: error: ‘createAlignmentEngine’ is not a member of ‘spoa’; did you mean ‘AlignmentEngine’?
586 | auto alignment_engine = spoa::createAlignmentEngine(static_castspoa::AlignmentType(0), 5, -10, -4, -4);
| ^~~~~~~~~~~~~~~~~~~~~
| AlignmentEngine
bmean.cpp:588:21: error: ‘createGraph’ is not a member of ‘spoa’
588 | auto graph = spoa::createGraph();
| ^~~~~~~~~~~
make: *** [bmean.o] Error 1"
Looking forward to your reply gratefully!
Wang Rongshu
The text was updated successfully, but these errors were encountered:
Hi, I am so sorry to disturb you again. After testing and adjustment, I found that the problem is caused by the high version of my compiler g++.
Best wishes!
Wang Rongshu
Hi:
I have followed your installation process. Environment includes python3.8, zlib1.2.12, cmake3.19.1, and g++10.2.0. Then I encountered the following problems during execution of ./install. Have you ever encountered them during your development?
"g++ -o bmean.o -c bmean.cpp -O3 -std=c++11 -lpthread -Ispoa/include -Ispoa/include/ -Lspoa/build/lib/ -lspoa
bmean.cpp: In function ‘std::vector<std::__cxx11::basic_string > consensus_SPOA(std::vector<std::__cxx11::basic_string >&, unsigned int, std::string)’:
bmean.cpp:586:32: error: ‘createAlignmentEngine’ is not a member of ‘spoa’; did you mean ‘AlignmentEngine’?
586 | auto alignment_engine = spoa::createAlignmentEngine(static_castspoa::AlignmentType(0), 5, -10, -4, -4);
| ^~~~~~~~~~~~~~~~~~~~~
| AlignmentEngine
bmean.cpp:588:21: error: ‘createGraph’ is not a member of ‘spoa’
588 | auto graph = spoa::createGraph();
| ^~~~~~~~~~~
make: *** [bmean.o] Error 1"
Looking forward to your reply gratefully!
Wang Rongshu
The text was updated successfully, but these errors were encountered: