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member questions in bmean.cpp #34

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Beauty9527 opened this issue Jun 10, 2022 · 1 comment
Open

member questions in bmean.cpp #34

Beauty9527 opened this issue Jun 10, 2022 · 1 comment

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@Beauty9527
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Hi:
I have followed your installation process. Environment includes python3.8, zlib1.2.12, cmake3.19.1, and g++10.2.0. Then I encountered the following problems during execution of ./install. Have you ever encountered them during your development?
"g++ -o bmean.o -c bmean.cpp -O3 -std=c++11 -lpthread -Ispoa/include -Ispoa/include/ -Lspoa/build/lib/ -lspoa
bmean.cpp: In function ‘std::vector<std::__cxx11::basic_string > consensus_SPOA(std::vector<std::__cxx11::basic_string >&, unsigned int, std::string)’:
bmean.cpp:586:32: error: ‘createAlignmentEngine’ is not a member of ‘spoa’; did you mean ‘AlignmentEngine’?
586 | auto alignment_engine = spoa::createAlignmentEngine(static_castspoa::AlignmentType(0), 5, -10, -4, -4);
| ^~~~~~~~~~~~~~~~~~~~~
| AlignmentEngine
bmean.cpp:588:21: error: ‘createGraph’ is not a member of ‘spoa’
588 | auto graph = spoa::createGraph();
| ^~~~~~~~~~~
make: *** [bmean.o] Error 1"
Looking forward to your reply gratefully!
Wang Rongshu

@Beauty9527
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Hi, I am so sorry to disturb you again. After testing and adjustment, I found that the problem is caused by the high version of my compiler g++.
Best wishes!
Wang Rongshu

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