Inconsistencies between GEMM fitting code ALL COD.docx and csv files

[muoten]

There are several inconsistencies between code in GEMM fitting code ALL COD.docx and the provided files.

Most of them can be apparently easily circumvented: removing extra spaces after filename, replacing ap_exp by ap.exp and viceversa. But several inconsistencies and required fixes are not so straightforward:

• There is no China results.csv. There is instead China IND + CONT results and it's not clear that this is the required file.
• DUELS results uses "," as separator instead of ";", despite what is indicated in R code. It has no 9 columns (so f=as.character(dataDUELS[a:e,9]) gets NULL) and order of columns 3 to 5 in header is not beta,se,tau but tau, beta, se
• CTS results.csv has no 9 columns, so f gets NULL, and weight is not columns 7 but 6. Same for VHM&PP results.csv
• output=cbind(f, weight, mu, tau, beta, se); out=subset(output, weight>0) generates 5 columns. So se=as.numeric(out[,6]) fails. And it seems also the column index of wt, mu, tau, beta and se is not right too.
• ...

Could you please provide some updated code consistent with csv files, or at least some advice to succesfully run the script?

Thanks. Regards