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Characterisation appears to be running in UI but never completes (and cannot be stopped) because server has errored:
2024-07-11 10:55:33,341 |MX3.HWR|DEBUG | [2024-Jul-11 10:55] 127.0.0.1 GET http /mxcube/api/v0.1/queue/queue_state? 5xx INTERNAL SERVER ERROR
Traceback (most recent call last):
File "/home/bocciare/tools/micromamba/envs/mxcubeweb/lib/python3.10/site-packages/flask/app.py", line 880, in full_dispatch_request
rv = self.dispatch_request()
File "/home/bocciare/tools/micromamba/envs/mxcubeweb/lib/python3.10/site-packages/flask/app.py", line 865, in dispatch_request
return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args) # type: ignore[no-any-return]
File "/home/bocciare/tools/micromamba/envs/mxcubeweb/lib/python3.10/site-packages/flask_security/decorators.py", line 432, in decorated_view
return current_app.ensure_sync(fn)(*args, **kwargs)
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/routes/queue.py", line 130, in queue_get_state
resp = jsonify(app.queue.get_queue_state())
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 260, in get_queue_state
queue = self.queue_to_dict(include_lims_data=True)
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 175, in queue_to_dict
self.queue_to_dict_rec(node, include_lims_data),
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 734, in queue_to_dict_rec
result.append(self._handle_sample(node, include_lims_data))
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 695, in _handle_sample
"tasks": self.queue_to_dict_rec(node, include_lims_data),
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 762, in queue_to_dict_rec
result.extend(self.queue_to_dict_rec(node, include_lims_data))
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 740, in queue_to_dict_rec
result.append(self._handle_char(sample_node, node, include_lims_data))
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 596, in _handle_char
originID, task = self._handle_diffraction_plan(node, sample_node)
File "/home/bocciare/workspace/mxcubeweb/mxcubeweb/core/components/queue.py", line 625, in _handle_diffraction_plan
for col in collections:
TypeError: 'NoneType' object is not iterable
The text was updated successfully, but these errors were encountered:
axelboc
changed the title
Internal Server Error when running charecterisation in mock environment
Internal Server Error when running characterisation in mock environment
Jul 11, 2024
The text was updated successfully, but these errors were encountered: