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realtime access to channel states from the minknow API? #63

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JasonNPitt opened this issue Jan 3, 2024 · 1 comment
Open

realtime access to channel states from the minknow API? #63

JasonNPitt opened this issue Jan 3, 2024 · 1 comment

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@JasonNPitt
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I'd like to be able to access the channel states during a run using the api, but am unable to determine where those values are available. The values I'm describing are outputted at the end of the run to the pore_actvity_FAW(...).csv file

@0x55555555
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Hi @JasonNPitt,

Please see https://github.com/nanoporetech/minknow_api/blob/master/proto/minknow_api/data.proto#L39 - this provides an instant snapshot of the channel states.

This API: https://github.com/nanoporetech/minknow_api/blob/master/proto/minknow_api/statistics.proto#L15 provides access to the values over time.

I hope that helps,

  • George

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