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LyChI (Layered Chemical Identifier)
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===================================
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- This directory contains code for BARD structure standardizer. To build
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- simply type
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+ This directory contains code for BARD/GSRS structure standardizer and hash-code generator.
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+ To build simply type:
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+
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+ ```
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+ bash make.sh
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+ ```
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+
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+ You will need to have maven installed. Inside the ` make.sh ` script it simply adds the dependencies and calls ` mvn clean package ` .
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+ This will build 2 jar files (one with dependencies and one without). They can be located in the ` target ` directory, and will look like:
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```
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- ant
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+ target/lychi-0.5.1.jar
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+ target/lychi-0.5.1-jar-with-dependencies.jar
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```
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- To build a self-contained jar with dependencies included, use `ant
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- all` instead. The self-contained jar file can be invoked directly;
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- e.g.,
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+ The self-contained jar file can be invoked directly. For example:
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```
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- java -jar dist /lychi-all-v0.1 .jar tests/standardizer_case1.smi
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+ java -jar target /lychi-0.5.1-jar-with-dependencies .jar tests/standardizer_case1.smi
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```
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+
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