From 19b74f08f766b89fe9ee6a1d75ac383e7561289c Mon Sep 17 00:00:00 2001
From: Joshua Allen <jallen17@illinois.edu>
Date: Thu, 19 Sep 2024 18:31:48 -0500
Subject: [PATCH] Moved to corect location

---
 neat/models/error_models.py | 10 ++++++++++
 neat/models/models.py       | 10 ----------
 2 files changed, 10 insertions(+), 10 deletions(-)

diff --git a/neat/models/error_models.py b/neat/models/error_models.py
index 5f8289d..b57c849 100644
--- a/neat/models/error_models.py
+++ b/neat/models/error_models.py
@@ -107,6 +107,16 @@ def quality_index_remap(self, input_read_length, original_read_length):
             return np.array([max([0, original_read_length * n // input_read_length]) for n in range(input_read_length)])
 
 
+class MarkovModel:
+    def __init__(self):
+        # TODO
+        pass
+
+    def get_quality_scores(self):
+        # TODO
+        pass
+
+
 class SequencingErrorModel(SnvModel, DeletionModel, InsertionModel, TraditionalModel):
     """
     This is a SequencingErrorModel class, based on the old SequencingError. This covers both errors and quality
diff --git a/neat/models/models.py b/neat/models/models.py
index 8f2d569..5ad83e1 100644
--- a/neat/models/models.py
+++ b/neat/models/models.py
@@ -525,16 +525,6 @@ def get_quality_scores(self,
         return temp_qual_array[:input_read_length]
 
 
-class MarkovModel:
-    def __init__(self):
-        # TODO
-        pass
-
-    def get_quality_scores(self):
-        # TODO
-        pass
-
-
 class ErrorContainer:
     """
     Holds data for a single error