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batch failure logging and qc_testing / priors + region props #9

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ergonyc opened this issue Dec 6, 2022 · 1 comment
Open
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batch failure logging and qc_testing / priors + region props #9

ergonyc opened this issue Dec 6, 2022 · 1 comment
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enhancement New feature or request question Further information is requested

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ergonyc commented Dec 6, 2022 •
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QC logging.
We need to fail nicely when the segmentations fail. We will do this by collecting the regionprops from the segmented objects and comparing with prior expection.

  • regionprops. this should be straighforward. at first its just "area" and numbers of organelles, and "total" areas.
  • priors. need a class wrapper or something to contain the priors for the
@ergonyc ergonyc added enhancement New feature or request question Further information is requested labels Dec 6, 2022
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ergonyc commented Jan 31, 2023

Decision has been made to depricate QC loggin for now. REGIONPROPS still active

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