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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(add_ancestor)
export(add_death)
export(add_disease)
export(add_disease_genes)
export(add_evidence)
export(add_gene_frequency)
export(add_genes)
export(add_gpt_annotations)
export(add_hpo_definition)
export(add_hpo_id)
export(add_hpo_name)
export(add_info_content)
export(add_mondo)
export(add_ndisease)
export(add_omop)
export(add_onset)
export(add_ont_lvl)
export(add_pheno_frequency)
export(add_prevalence)
export(add_severity)
export(add_tier)
export(annotate_phenos)
export(example_phenos)
export(filter_descendants)
export(get_gene_lists)
export(get_hpo)
export(get_hpo_id_direct)
export(get_mappings)
export(get_top_phenos)
export(gpt_annot_check)
export(gpt_annot_class)
export(gpt_annot_codify)
export(gpt_annot_melt)
export(gpt_annot_plot)
export(gpt_annot_plot_branches)
export(gpt_annot_read)
export(hpo_api)
export(hpo_to_matrix)
export(list_columns)
export(list_deaths)
export(list_onsets)
export(load_phenotype_to_genes)
export(make_igraph_object)
export(make_network_object)
export(make_network_plot)
export(make_phenos_dataframe)
export(make_tiers)
export(map_disease)
export(map_phenotypes)
export(newlines_to_definition)
export(per_branch_plot)
export(phenos_to_granges)
export(plot_arrow)
export(plot_evidence)
export(plot_top_phenos)
export(search_hpo)
import(KGExplorer)
import(data.table)
import(simona)
importFrom(KGExplorer,map_mondo)
importFrom(data.table,":=")
importFrom(data.table,.EACHI)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(data.table,fread)
importFrom(data.table,merge.data.table)
importFrom(data.table,setnames)
importFrom(stats,as.formula)
importFrom(stats,cor)
importFrom(stats,na.omit)
importFrom(stats,setNames)
importFrom(stats,terms)
importFrom(stringr,str_split)
importFrom(tools,R_user_dir)
importFrom(utils,data)
importFrom(utils,download.file)
importFrom(utils,head)
importFrom(utils,tail)