From 5d35f2801f7039e468a0cdb14954c7d8302cfde3 Mon Sep 17 00:00:00 2001 From: bschilder <34280215+bschilder@users.noreply.github.com> Date: Sun, 5 Nov 2023 01:25:33 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20neurogen?= =?UTF-8?q?omics/rworkflows@09581233056d17fcf6d6ed357cb481855d4f7691=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- articles/bioconductor.html | 6 +++--- articles/depgraph.html | 2 +- articles/docker.html | 2 +- articles/repos.html | 2 +- articles/rworkflows.html | 18 +++++++++--------- index.html | 2 +- pkgdown.yml | 2 +- reference/construct_conda_yml.html | 2 +- reference/fill_description.html | 2 +- reference/use_codespace.html | 2 +- reference/use_dockerfile.html | 2 +- reference/use_issue_template.html | 4 ++-- reference/use_readme.html | 2 +- reference/use_vignette_docker.html | 2 +- reference/use_vignette_getstarted.html | 2 +- reference/use_workflow.html | 2 +- 16 files changed, 27 insertions(+), 27 deletions(-) diff --git a/articles/bioconductor.html b/articles/bioconductor.html index 44fec720..30bc02ea 100644 --- a/articles/bioconductor.html +++ b/articles/bioconductor.html @@ -98,7 +98,7 @@


-Vignette updated: Nov-04-2023
+Vignette updated: Nov-05-2023

Source: vignettes/bioconductor.Rmd @@ -184,7 +184,7 @@

## runner_os: ${{ runner.os }} ## cache_version: cache-v1 ## docker_registry: ghcr.io -
## Saving yaml ==> /tmp/RtmpfTn4ti/rworkflows.devel.yml
+
## Saving yaml ==> /tmp/RtmpE7ZpJS/rworkflows.devel.yml

@@ -251,7 +251,7 @@

## runner_os: ${{ runner.os }} ## cache_version: cache-v1 ## docker_registry: ghcr.io -
## Saving yaml ==> /tmp/RtmpfTn4ti/rworkflows.RELEASE_3_17.yml
+
## Saving yaml ==> /tmp/RtmpE7ZpJS/rworkflows.RELEASE_3_17.yml

diff --git a/articles/depgraph.html b/articles/depgraph.html index 7923d610..1d01ae8b 100644 --- a/articles/depgraph.html +++ b/articles/depgraph.html @@ -98,7 +98,7 @@


-Vignette updated: Nov-04-2023
+Vignette updated: Nov-05-2023

Source: vignettes/depgraph.Rmd diff --git a/articles/docker.html b/articles/docker.html index ede8c0ce..a51d71e4 100644 --- a/articles/docker.html +++ b/articles/docker.html @@ -98,7 +98,7 @@


-Vignette updated: Nov-04-2023
+Vignette updated: Nov-05-2023

Source: vignettes/docker.Rmd diff --git a/articles/repos.html b/articles/repos.html index f5458d46..635ddcbb 100644 --- a/articles/repos.html +++ b/articles/repos.html @@ -98,7 +98,7 @@


-Vignette updated: Nov-04-2023
+Vignette updated: Nov-05-2023

Source: vignettes/repos.Rmd diff --git a/articles/rworkflows.html b/articles/rworkflows.html index 6fadc477..1593fe5c 100644 --- a/articles/rworkflows.html +++ b/articles/rworkflows.html @@ -98,7 +98,7 @@


-Vignette updated: Nov-04-2023
+Vignette updated: Nov-05-2023

Source: vignettes/rworkflows.Rmd @@ -148,7 +148,7 @@

dynamic action force_new = TRUE, ## Use default save_dir in practice save_dir = tempdir()) -
## Saving yaml ==> /tmp/RtmpdXs3YR/rworkflows.yml
+
## Saving yaml ==> /tmp/RtmpBiS45n/rworkflows.yml

static workflow @@ -165,7 +165,7 @@

static workflow force_new = TRUE, ## Use default save_dir in practice save_dir = tempdir())

-
## Saving yaml ==> /tmp/RtmpdXs3YR/rworkflows_static.yml
+
## Saving yaml ==> /tmp/RtmpBiS45n/rworkflows_static.yml
@@ -207,7 +207,7 @@ 

 ## Use default save_dir in practice
 dockerfile <- rworkflows::use_dockerfile(save_dir = tempdir())
-
## Creating new Docker file ==> /tmp/RtmpdXs3YR/Dockerfile
+
## Creating new Docker file ==> /tmp/RtmpBiS45n/Dockerfile

Templates @@ -225,7 +225,7 @@

README 
 ## Use default save_dir in practice
 readme <- rworkflows::use_readme(save_dir = tempdir())
-
## Creating new README file ==> /tmp/RtmpdXs3YR/README.Rmd
+
## Creating new README file ==> /tmp/RtmpBiS45n/README.Rmd

Vignette: Get started @@ -236,7 +236,7 @@

Vignette: Get started## Use default save_dir in practice vignette1 <- rworkflows::use_vignette_getstarted(package = "mypackage", save_dir = tempdir())

-
## Creating new vignette file ==> /tmp/RtmpdXs3YR/vignettes/mypackage.Rmd
+
## Creating new vignette file ==> /tmp/RtmpBiS45n/vignettes/mypackage.Rmd

Vignette: docker @@ -259,7 +259,7 @@

Vignette: docker## Use default save_dir in practice vignette2 <- rworkflows::use_vignette_docker(docker_org = "neurogenomics", save_dir = tempdir())

-
## Creating new vignette file ==> /tmp/RtmpdXs3YR/vignettes/docker.Rmd
+
## Creating new vignette file ==> /tmp/RtmpBiS45n/vignettes/docker.Rmd
@@ -347,7 +347,7 @@

Using Python## runner_os: ${{ runner.os }} ## cache_version: cache-v1 ## docker_registry: ghcr.io -
## Saving yaml ==> /tmp/RtmpdXs3YR/rworkflows.yml
+
## Saving yaml ==> /tmp/RtmpBiS45n/rworkflows.yml

Using conda @@ -460,7 +460,7 @@

Using conda## docker_registry: ghcr.io ## miniforge_variant: '' ## environment_file: /__w/rworkflows/rworkflows/myenv_conda.yml -
## Saving yaml ==> /tmp/RtmpdXs3YR/rworkflows.yml
+
## Saving yaml ==> /tmp/RtmpBiS45n/rworkflows.yml
 ## Cleanup files
 try({file.remove(environment_file)})
diff --git a/index.html b/index.html index 3c91f35c..3167ccf1 100644 --- a/index.html +++ b/index.html @@ -102,7 +102,7 @@ Authors: Brian Schilder, Alan Murphy, Nathan Skene

-README updated: Nov-04-2023 +README updated: Nov-05-2023

Intro diff --git a/pkgdown.yml b/pkgdown.yml index ea6182ff..68b52140 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -7,5 +7,5 @@ articles: docker: docker.html repos: repos.html rworkflows: rworkflows.html -last_built: 2023-11-04T17:24Z +last_built: 2023-11-05T01:24Z diff --git a/reference/construct_conda_yml.html b/reference/construct_conda_yml.html index 89261bc6..c292f182 100644 --- a/reference/construct_conda_yml.html +++ b/reference/construct_conda_yml.html @@ -141,7 +141,7 @@

Examples

return_path = FALSE, ## Writing to temp only for example save_path=tempfile(fileext="myenv_conda.yml")) -#> Saving yaml ==> /tmp/RtmpsXIuPh/file33c0a91aaa3myenv_conda.yml +#> Saving yaml ==> /tmp/Rtmpl8tcr6/file320547477c78myenv_conda.yml
diff --git a/reference/fill_description.html b/reference/fill_description.html index 3efa242e..f0f77fa9 100644 --- a/reference/fill_description.html +++ b/reference/fill_description.html @@ -282,7 +282,7 @@

Examples

#> Updating: biocViews --> Genetics, SystemsBiology #> Updating: URL --> https://github.com/OwnerName/MyPackageName #> Updating: BugReports --> https://github.com/OwnerName/MyPackageName/issues -#> Saving updated file: /tmp/RtmpsXIuPh/file33c0483f2c04DESCRIPTION +#> Saving updated file: /tmp/Rtmpl8tcr6/file32054f51fbd5DESCRIPTION diff --git a/reference/use_codespace.html b/reference/use_codespace.html index 267e9640..7de8bc88 100644 --- a/reference/use_codespace.html +++ b/reference/use_codespace.html @@ -145,7 +145,7 @@

Value

Examples

path <- use_codespace(save_dir=tempdir())
-#> Creating new dev container config file ==> /tmp/RtmpsXIuPh/devcontainer.json
+#> Creating new dev container config file ==> /tmp/Rtmpl8tcr6/devcontainer.json
diff --git a/reference/use_dockerfile.html b/reference/use_dockerfile.html index 1ad75763..2cd90013 100644 --- a/reference/use_dockerfile.html +++ b/reference/use_dockerfile.html @@ -124,7 +124,7 @@

Value

Examples

path <- use_dockerfile(save_dir=tempdir())
-#> Creating new Docker file ==> /tmp/RtmpsXIuPh/Dockerfile
+#> Creating new Docker file ==> /tmp/Rtmpl8tcr6/Dockerfile
diff --git a/reference/use_issue_template.html b/reference/use_issue_template.html index 23c743d1..00f189ae 100644 --- a/reference/use_issue_template.html +++ b/reference/use_issue_template.html @@ -122,8 +122,8 @@

Value

Examples

path <- use_issue_template(save_dir=tempdir())
-#> Creating new Issue Template ==> /tmp/RtmpsXIuPh/bug_report.md
-#> Creating new Issue Template ==> /tmp/RtmpsXIuPh/feature_request.md
+#> Creating new Issue Template ==> /tmp/Rtmpl8tcr6/bug_report.md
+#> Creating new Issue Template ==> /tmp/Rtmpl8tcr6/feature_request.md
diff --git a/reference/use_readme.html b/reference/use_readme.html index 81a081ce..cfca84f8 100644 --- a/reference/use_readme.html +++ b/reference/use_readme.html @@ -120,7 +120,7 @@

Value

Examples

## use default save_dir in practice
 path <- use_readme(save_dir = tempdir()) 
-#> Creating new README file ==> /tmp/RtmpsXIuPh/README.Rmd
+#> Creating new README file ==> /tmp/Rtmpl8tcr6/README.Rmd
diff --git a/reference/use_vignette_docker.html b/reference/use_vignette_docker.html index 1e1327ba..cd0b00fa 100644 --- a/reference/use_vignette_docker.html +++ b/reference/use_vignette_docker.html @@ -194,7 +194,7 @@

Examples

docker_org = "neurogenomics", ## use default save_dir in practice save_dir = tempdir()) -#> Creating new vignette file ==> /tmp/RtmpsXIuPh/vignettes/docker.Rmd +#> Creating new vignette file ==> /tmp/Rtmpl8tcr6/vignettes/docker.Rmd diff --git a/reference/use_vignette_getstarted.html b/reference/use_vignette_getstarted.html index 56cd37f9..29adb98f 100644 --- a/reference/use_vignette_getstarted.html +++ b/reference/use_vignette_getstarted.html @@ -141,7 +141,7 @@

Examples

path <- use_vignette_getstarted(package = "mypackage",
                                 ## use default save_dir in practice
                                 save_dir = tempdir())
-#> Creating new vignette file ==> /tmp/RtmpsXIuPh/vignettes/mypackage.Rmd
+#> Creating new vignette file ==> /tmp/Rtmpl8tcr6/vignettes/mypackage.Rmd
diff --git a/reference/use_workflow.html b/reference/use_workflow.html index fe3f8221..384b1a57 100644 --- a/reference/use_workflow.html +++ b/reference/use_workflow.html @@ -380,7 +380,7 @@

Value

Examples

path <- use_workflow(save_dir = file.path(tempdir(),".github","workflows"))
-#> Saving yaml ==> /tmp/RtmpsXIuPh/.github/workflows/rworkflows.yml
+#> Saving yaml ==> /tmp/Rtmpl8tcr6/.github/workflows/rworkflows.yml