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4D images are converted into 3D images at the beginning of the pipeline by averaging according to the time dimension. However, because we try to resample back the final segmentation to the original shape at the end of the pipeline, we get an error due to the missing time dimension.
Description
4D images are converted into 3D images at the beginning of the pipeline by averaging according to the time dimension. However, because we try to resample back the final segmentation to the original shape at the end of the pipeline, we get an error due to the missing time dimension.
Related issues
spinalcordtoolbox/spinalcordtoolbox#4757 (comment)
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