Need to build new container image

[marcodelapierre]

Hi @pditommaso , we need to build a new version 1.3 and push it to quay.io.

Version 1.2 is broken due to the Dockerfile update with micromamba, which initially had no PATH update.

I have already bumped the version here: https://github.com/nextflow-io/rnaseq-nf/blob/master/docker/Makefile

So it is just a matter of running the Makefile; if you want to give me admin access to quay.io/nextflow I can do it (I am marcodelapierre there as well), or otherwise I will leave it to you

[toniher]

Yeah, I noticed that 1.2 is also missing ps, which leads to issues running it with Tower.

[pditommaso]

The push refers to repository [quay.io/nextflow/rnaseq-nf]
3fd35ef02eda: Preparing 
61b7068cf278: Preparing 
503e642d5ebf: Preparing 
c3957bc87975: Preparing 
5f70bf18a086: Preparing 
0eb428f50e73: Waiting 
65734c4ecb14: Waiting 
5ed208d0a888: Waiting 
9f170dfecb6d: Waiting 
16dea3230ded: Waiting 
cb4596cc1454: Waiting 
denied: System is currently read-only. Pulls will succeed but all write operations are currently suspended.

This! 👆

[marcodelapierre]

This looks like a Quay issue.
Maybe some server maintenance going on on their end?

[pditommaso]

Indeed, they had some maintenance activity. Solved via afbdd46

[pditommaso]

I'm re-opening this because tests are failing. @marcodelapierre can you please investigate it?

[marcodelapierre]

Sure, see #22