diff --git a/phylogenetic/rules/prepare_sequences.smk b/phylogenetic/rules/prepare_sequences.smk index b0d05722..211c78ab 100644 --- a/phylogenetic/rules/prepare_sequences.smk +++ b/phylogenetic/rules/prepare_sequences.smk @@ -20,8 +20,8 @@ rule download: sequences = "data/sequences_{serotype}.fasta.zst", metadata = "data/metadata_{serotype}.tsv.zst" params: - sequences_url = "https://data.nextstrain.org/files/dengue/sequences_{serotype}.fasta.zst", - metadata_url = "https://data.nextstrain.org/files/dengue/metadata_{serotype}.tsv.zst" + sequences_url = "https://data.nextstrain.org/files/workflows/dengue/sequences_{serotype}.fasta.zst", + metadata_url = "https://data.nextstrain.org/files/workflows/dengue/metadata_{serotype}.tsv.zst" shell: """ curl -fsSL --compressed {params.sequences_url:q} --output {output.sequences}