diff --git a/conf/modules/gens_pon.config b/conf/modules/gens_pon.config index 734d754..8ebd6cb 100644 --- a/conf/modules/gens_pon.config +++ b/conf/modules/gens_pon.config @@ -53,7 +53,7 @@ process { withName: '.*GENS_PON:GATK4_CREATEREADCOUNTPANELOFNORMALS' { ext.args = { ["--minimum-interval-median-percentile ${params.gens_min_interval_median_percentile}", - "--maximum-chunk-size ${params.maximum_chunk_size}"].join(" ")} + "--maximum-chunk-size ${params.gens_maximum_chunk_size}"].join(" ")} publishDir = [ mode: params.publish_dir_mode, path: { "${params.outdir}/gens_pon/createreadcountpanelofnormals" },