From 169679f3cc2c7a7b08e2052fccf0a8ee50ded711 Mon Sep 17 00:00:00 2001
From: Chris Cheshire <chris.j.cheshire@gmail.com>
Date: Sat, 21 Oct 2023 11:31:24 +0200
Subject: [PATCH] Whitespace

---
 conf/modules.config | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf/modules.config b/conf/modules.config
index b69b0a4a..b515a446 100644
--- a/conf/modules.config
+++ b/conf/modules.config
@@ -359,7 +359,7 @@ if(params.run_read_filter) {
             if (params.mito_name == null && params.genome == null){
                 ext.args2 = ''
             } else if (params.mito_name == null) {
-                ext.args2 = { params.remove_mitochondrial_reads ? "-e 'rname != \"${params.genomes[ params.genome ][ "mito_name"]}\"'" : '' }
+                ext.args2 = { params.remove_mitochondrial_reads ? "-e 'rname != \"${params.genomes[params.genome]["mito_name"]}\"'" : '' }
             } else {
                 ext.args2 = { params.remove_mitochondrial_reads ? "-e 'rname != \"${params.mito_name}\"'" : '' }
             }