From 81baaf14fabfbe338486b05613447942d0316752 Mon Sep 17 00:00:00 2001
From: Chris Cheshire <chris.j.cheshire@gmail.com>
Date: Sat, 11 Nov 2023 13:31:59 +0000
Subject: [PATCH] Auto scale igv groups together

---
 bin/igv_files_to_session.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/bin/igv_files_to_session.py b/bin/igv_files_to_session.py
index 222b22cb..9960cd80 100755
--- a/bin/igv_files_to_session.py
+++ b/bin/igv_files_to_session.py
@@ -159,7 +159,7 @@ def igv_files_to_session(XMLOut, ListFile, Genome, GtfBed, PathPrefix=""):
             )
         elif extension in [".bw", ".bigwig", ".tdf", ".bedGraph", ".bedgraph"]:
             XMLStr += (
-                '\t\t<Track altColor="0,0,178" autoScale="true" clazz="org.broad.igv.track.DataSourceTrack" color="%s" '
+                '\t\t<Track altColor="0,0,178" autoScale="true" autoscaleGroup="1" clazz="org.broad.igv.track.DataSourceTrack" color="%s" '
                 % (colour)
             )
             XMLStr += 'displayMode="COLLAPSED" featureVisibilityWindow="-1" fontSize="12" height="100" '