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Issues list

Merge nf-core template 3.2.0 into mhc-binding-subworkflow branch
#269 by jonasscheid was merged Feb 3, 2025 Loading…
3 of 11 tasks
1
Refactor variant prediction
#268 by jonasscheid was merged Feb 3, 2025 Loading…
2 of 11 tasks
2
Handle fasta
#266 by jonasscheid was merged Jan 31, 2025 Loading…
1 of 11 tasks
2
Refactor NetMHC modules and imports
#264 by jonasscheid was merged Jan 29, 2025 Loading…
1 of 11 tasks
2
Add supported_alleles.json to handle supported alleles per predictor
#262 by jonasscheid was merged Jan 29, 2025 Loading…
1 of 11 tasks
2
Important! Template update for nf-core/tools v3.2.0
#261 by nf-core-bot was merged Jan 30, 2025 Loading…
Add mhcnuggets module and harmonize prediction outputs
#259 by jonasscheid was merged Jan 27, 2025 Loading…
11 tasks
2
Important! Template update for nf-core/tools v3.1.2
#257 by nf-core-bot was closed Jan 27, 2025 Loading…
1
Merge template 3.2.0
#256 by jonasscheid was merged Jan 30, 2025 Loading…
3 of 11 tasks
2
KeyError: 'Coding sequence' bug Something isn't working
#255 by gianfilippo was closed Jan 25, 2025
7
Important! Template update for nf-core/tools v3.1.1
#254 by nf-core-bot was closed Jan 20, 2025 Loading…
1
Add initial mhcflurry module
#253 by jonasscheid was merged Dec 17, 2024 Loading…
1 of 11 tasks
2
Add initial draft of netmhciipan module
#252 by jonasscheid was merged Dec 16, 2024 Loading…
11 tasks
2
Important! Template update for nf-core/tools v3.1.0
#251 by nf-core-bot was closed Dec 20, 2024 Loading…
1
Initial setup of netmhcpan module
#250 by jonasscheid was merged Dec 14, 2024 Loading…
11 tasks
1
Fix stub run in mhc binding subworkflow with new template
#249 by jonasscheid was merged Dec 10, 2024 Loading…
1 of 11 tasks
1
Template merge 3.0.2
#247 by jonasscheid was merged Nov 17, 2024 Loading…
4 of 11 tasks
1
Important! Template update for nf-core/tools v3.0.2
#246 by nf-core-bot was merged Nov 17, 2024 Loading…
Important! Template update for nf-core/tools v3.0.1
#245 by nf-core-bot was closed Oct 11, 2024 Loading…
1
Important! Template update for nf-core/tools v3.0.0
#244 by nf-core-bot was closed Oct 9, 2024 Loading…
1
Merge template updates up to 2.14.1
#243 by christopher-mohr was merged May 16, 2024 Loading…
3 of 11 tasks
8
Important! Template update for nf-core/tools v2.14.1
#242 by nf-core-bot was merged May 16, 2024 Loading…
Important! Template update for nf-core/tools v2.14.0
#241 by nf-core-bot was closed May 9, 2024 Loading…
1
Add stubs to all local modules
#239 by jonasscheid was merged Mar 28, 2024 Loading…
4 of 11 tasks
4
Release 2.3.1
#238 by jonasscheid was merged May 17, 2024 Loading…
4 of 11 tasks
16
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