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Jul-16 16:15:27.577 [Actor Thread 3] DEBUG nextflow.Nextflow - Ignoring exit because execution is already aborted -- message=HISAT2 index not found: /scratch/groups/ashbym/raj/lncRNA/grch38_snp_tran/genome_snp_tran
Jul-16 16:15:27.577 [Actor Thread 5] DEBUG nextflow.Nextflow - Ignoring exit because execution is already aborted -- message=Cannot find any reads matching: /scratch/groups/ashbym/raj/lncRNA/01.RawData/IMR_Con_1/IMR_Con_1_CKDL230021844-1A_HGL7JDSX7_L1_{1,2}.fq.gz
Plz check your fasta string in nextflow.config file. My config file has the appropriate paths and all dependencies are installed so can someone explain why this is occurring.
The text was updated successfully, but these errors were encountered:
This is the issue I am recieving
Jul-16 16:15:27.577 [Actor Thread 3] DEBUG nextflow.Nextflow - Ignoring exit because execution is already aborted -- message=HISAT2 index not found: /scratch/groups/ashbym/raj/lncRNA/grch38_snp_tran/genome_snp_tran
Jul-16 16:15:27.577 [Actor Thread 5] DEBUG nextflow.Nextflow - Ignoring exit because execution is already aborted -- message=Cannot find any reads matching: /scratch/groups/ashbym/raj/lncRNA/01.RawData/IMR_Con_1/IMR_Con_1_CKDL230021844-1A_HGL7JDSX7_L1_{1,2}.fq.gz
Plz check your fasta string in nextflow.config file. My config file has the appropriate paths and all dependencies are installed so can someone explain why this is occurring.
The text was updated successfully, but these errors were encountered: