diff --git a/.github/conda_skip.yml b/.github/conda_skip.yml index 44e43a740a4c..801fb9616fcc 100644 --- a/.github/conda_skip.yml +++ b/.github/conda_skip.yml @@ -45,6 +45,14 @@ # path: modules/nf-core/deepcell/mesmer # - profile: conda # path: modules/nf-core/deepvariant +- profile: conda + path: modules/nf-core/deepvariant/callvariants +- profile: conda + path: modules/nf-core/deepvariant/makeexamples +- profile: conda + path: modules/nf-core/deepvariant/postprocessvariants +- profile: conda + path: modules/nf-core/deepvariant/rundeepvariant # - profile: conda # path: modules/nf-core/ensemblvep/vep # - profile: conda @@ -97,6 +105,8 @@ # path: modules/nf-core/sentieon/bwaindex # - profile: conda # path: modules/nf-core/sentieon/bwamem +- profile: conda + path: modules/nf-core/sentieon/datametrics # - profile: conda # path: modules/nf-core/sentieon/dedup # - profile: conda @@ -127,6 +137,8 @@ # path: subworkflows/nf-core/vcf_annotate_ensemblvep # - profile: conda # path: subworkflows/nf-core/bcl_demultiplex +- profile: conda + path: subworkflows/nf-core/deepvariant # - profile: conda # path: subworkflows/nf-core/fastq_align_bamcmp_bwa # - profile: conda