diff --git a/modules/nf-core/angsd/docounts/meta.yml b/modules/nf-core/angsd/docounts/meta.yml
index 8381091f9c6..b1eec87da70 100644
--- a/modules/nf-core/angsd/docounts/meta.yml
+++ b/modules/nf-core/angsd/docounts/meta.yml
@@ -12,7 +12,7 @@ tools:
       documentation: "http://www.popgen.dk/angsd/"
       tool_dev_url: "https://github.com/ANGSD/angsd"
       doi: "10.1186/s12859-014-0356-4"
-      licence: "['GPL v3, MIT']"
+      licence: ["GPL v3, MIT"]
 input:
   - meta:
       type: map
diff --git a/modules/nf-core/angsd/docounts/tests/main.nf.test b/modules/nf-core/angsd/docounts/tests/main.nf.test
new file mode 100644
index 00000000000..68993421b82
--- /dev/null
+++ b/modules/nf-core/angsd/docounts/tests/main.nf.test
@@ -0,0 +1,43 @@
+
+nextflow_process {
+
+    name "Test Process ANGSD_DOCOUNTS"
+    script "../main.nf"
+    process "ANGSD_DOCOUNTS"
+    config "./nextflow.config"
+
+    tag "modules"
+    tag "modules_nfcore"
+    tag "angsd"
+    tag "angsd/docounts"
+
+    test("test-angsd-docounts") {
+
+        when {
+            process {
+                """
+                input[0] = [
+				[ id:'test', single_end:false ], // meta map
+                    file(params.modules_testdata_base_path + 'genomics/homo_sapiens/illumina/bam/test.paired_end.markduplicates.sorted.bam', checkIfExists: true),
+                    file(params.modules_testdata_base_path + 'genomics/homo_sapiens/illumina/bam/test.paired_end.markduplicates.sorted.bam.bai', checkIfExists: true),
+				    []
+				]
+
+                """
+            }
+        }
+
+        then {
+            assertAll(
+                { assert process.success },
+                { assert snapshot(
+                    path(process.out.counts[0][1]).linesGzip[0..5],
+                    file(process.out.icounts[0][1]).name,
+                    path(process.out.pos[0][1]).linesGzip[0..5],
+                    process.out.versions
+                    ).match() }
+            )
+        }
+    }
+
+}
diff --git a/modules/nf-core/angsd/docounts/tests/main.nf.test.snap b/modules/nf-core/angsd/docounts/tests/main.nf.test.snap
new file mode 100644
index 00000000000..9a282b158a2
--- /dev/null
+++ b/modules/nf-core/angsd/docounts/tests/main.nf.test.snap
@@ -0,0 +1,31 @@
+{
+    "test-angsd-docounts": {
+        "content": [
+            [
+                "ind0TotDepth\t",
+                "1\t",
+                "1\t",
+                "1\t",
+                "1\t",
+                "1\t"
+            ],
+            "test.icnts.gz",
+            [
+                "chr\tpos\ttotDepth",
+                "chr21\t5011214\t1",
+                "chr21\t5011215\t1",
+                "chr21\t5011216\t1",
+                "chr21\t5011217\t1",
+                "chr21\t5011218\t1"
+            ],
+            [
+                "versions.yml:md5,211a931297225fefaa891d02b755e215"
+            ]
+        ],
+        "meta": {
+            "nf-test": "0.8.4",
+            "nextflow": "24.04.4"
+        },
+        "timestamp": "2024-08-21T15:43:59.931683"
+    }
+}
\ No newline at end of file
diff --git a/modules/nf-core/angsd/docounts/tests/nextflow.config b/modules/nf-core/angsd/docounts/tests/nextflow.config
new file mode 100644
index 00000000000..71db903efbf
--- /dev/null
+++ b/modules/nf-core/angsd/docounts/tests/nextflow.config
@@ -0,0 +1,5 @@
+process {
+    withName: ANGSD_DOCOUNTS {
+        ext.args = "-iCounts 1 -doDepth -dumpCounts 2"
+    }
+}
diff --git a/tests/config/pytest_modules.yml b/tests/config/pytest_modules.yml
index 89983665502..c7991010d0b 100644
--- a/tests/config/pytest_modules.yml
+++ b/tests/config/pytest_modules.yml
@@ -7,9 +7,6 @@ amps:
 angsd/contamination:
   - modules/nf-core/angsd/contamination/**
   - tests/modules/nf-core/angsd/contamination/**
-angsd/docounts:
-  - modules/nf-core/angsd/docounts/**
-  - tests/modules/nf-core/angsd/docounts/**
 arcashla/extract:
   - modules/nf-core/arcashla/extract/**
   - tests/modules/nf-core/arcashla/extract/**
diff --git a/tests/modules/nf-core/angsd/docounts/main.nf b/tests/modules/nf-core/angsd/docounts/main.nf
deleted file mode 100644
index 2188a097c03..00000000000
--- a/tests/modules/nf-core/angsd/docounts/main.nf
+++ /dev/null
@@ -1,17 +0,0 @@
-#!/usr/bin/env nextflow
-
-nextflow.enable.dsl = 2
-
-include { ANGSD_DOCOUNTS } from '../../../../../modules/nf-core/angsd/docounts/main.nf'
-
-workflow test_angsd_docounts {
-
-    input = [
-        [ id:'test', single_end:false ], // meta map
-        file(params.test_data['homo_sapiens']['illumina']['test_paired_end_markduplicates_sorted_bam'], checkIfExists: true),
-        file(params.test_data['homo_sapiens']['illumina']['test_paired_end_markduplicates_sorted_bam_bai'], checkIfExists: true),
-        []
-    ]
-
-    ANGSD_DOCOUNTS ( input )
-}
diff --git a/tests/modules/nf-core/angsd/docounts/nextflow.config b/tests/modules/nf-core/angsd/docounts/nextflow.config
deleted file mode 100644
index 600e1be048f..00000000000
--- a/tests/modules/nf-core/angsd/docounts/nextflow.config
+++ /dev/null
@@ -1,9 +0,0 @@
-process {
-
-    publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
-
-    withName: ANGSD_DOCOUNTS {
-        ext.args = "-iCounts 1 -doDepth -dumpCounts 2"
-    }
-
-}
diff --git a/tests/modules/nf-core/angsd/docounts/test.yml b/tests/modules/nf-core/angsd/docounts/test.yml
deleted file mode 100644
index eea06d7bcc5..00000000000
--- a/tests/modules/nf-core/angsd/docounts/test.yml
+++ /dev/null
@@ -1,11 +0,0 @@
-- name: angsd docounts test_angsd_docounts
-  command: nextflow run ./tests/modules/nf-core/angsd/docounts -entry test_angsd_docounts -c ./tests/config/nextflow.config  -c ./tests/modules/nf-core/angsd/docounts/nextflow.config
-  tags:
-    - angsd/docounts
-    - angsd
-  files:
-    - path: output/angsd/test.counts.gz
-      contains: ["ind0TotDepth"]
-    - path: output/angsd/test.icnts.gz
-    - path: output/angsd/test.pos.gz
-      contains: ["chr	pos	totDepth"]