From 5de8457cf0577d39c9eb35e815165c98c4590cef Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?=C3=96mer=20An?= <bounlu@gmail.com>
Date: Wed, 11 Sep 2024 13:22:42 +0800
Subject: [PATCH 1/2] fixed typo

---
 lib/Processes.groovy | 2 +-
 lib/Utils.groovy     | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/lib/Processes.groovy b/lib/Processes.groovy
index 480e10bb..98245f6d 100644
--- a/lib/Processes.groovy
+++ b/lib/Processes.groovy
@@ -31,7 +31,7 @@ class Processes {
                     return Constants.Process.valueOf(name.toUpperCase())
                 } catch(java.lang.IllegalArgumentException e) {
                     def processes_str = Processes.getProcessNames().join('\n  - ')
-                    log.error "recieved invalid process: '${name}'. Valid options are:\n  - ${processes_str}"
+                    log.error "received invalid process: '${name}'. Valid options are:\n  - ${processes_str}"
                     Nextflow.exit(1)
                 }
             }
diff --git a/lib/Utils.groovy b/lib/Utils.groovy
index 38fae00c..77b0a010 100644
--- a/lib/Utils.groovy
+++ b/lib/Utils.groovy
@@ -381,7 +381,7 @@ class Utils {
         def run_mode_enum = Utils.getEnumFromString(run_mode, Constants.RunMode)
         if (!run_mode_enum) {
             def run_modes_str = Utils.getEnumNames(Constants.RunMode).join('\n  - ')
-            log.error "recieved an invalid run mode: '${run_mode}'. Valid options are:\n  - ${run_modes_str}"
+            log.error "received an invalid run mode: '${run_mode}'. Valid options are:\n  - ${run_modes_str}"
             Nextflow.exit(1)
         }
         return run_mode_enum

From a31ca62e3157760de00bbb59c65ab58fc49aa56d Mon Sep 17 00:00:00 2001
From: Stephen Watts <hello@stephen.ac>
Date: Thu, 12 Sep 2024 09:02:37 +1000
Subject: [PATCH 2/2] Update CHANGELOG.md

---
 CHANGELOG.md | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 0d2bcdbe..30a099e8 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,10 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and this project mostly adheres to
 [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [dev]
+
+- [98](https://github.com/nf-core/oncoanalyser/pull/98) - Fix typos in error messages for process and run mode check
+
 ## [[1.0.0](https://github.com/nf-core/oncoanalyser/releases/tag/1.0.0)] Pied Currawong - 2024-08-26
 
 Initial release of nf-core/oncoanalyser, created with the [nf-core](https://nf-co.re/) template.