diff --git a/modules/local/st_read_data.nf b/modules/local/st_read_data.nf index e159853..eac6100 100644 --- a/modules/local/st_read_data.nf +++ b/modules/local/st_read_data.nf @@ -9,7 +9,7 @@ process ST_READ_DATA { conda "conda-forge::scanpy=1.7.2 conda-forge::matplotlib=3.6.3 conda-forge::pandas=1.5.3" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/scanpy:1.7.2--pyhdfd78af_0' : - 'quay.io/biocontainers/scanpy:1.7.2--pyhdfd78af_0' }" + 'biocontainers/scanpy:1.7.2--pyhdfd78af_0' }" input: tuple val (meta), path("${meta.id}/*")