From 9c7ce2bc4919a6092c95311b38ee12e48d3c38e9 Mon Sep 17 00:00:00 2001
From: Christophe Avenel <christophe.avenel@it.uu.se>
Date: Thu, 30 Nov 2023 13:52:26 +0100
Subject: [PATCH] Add xdg paths to fix scanpy cache issue

---
 conf/modules.config | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/conf/modules.config b/conf/modules.config
index f439574..f212649 100644
--- a/conf/modules.config
+++ b/conf/modules.config
@@ -9,6 +9,10 @@
         ext.prefix = File name prefix for output files.
 ----------------------------------------------------------------------------------------
 */
+env {
+    XDG_CACHE_HOME = "./.xdg_cache_home"
+    XDG_DATA_HOME = "./.xdg_data_home"
+}
 
 process {