diff --git a/CHANGELOG.md b/CHANGELOG.md index 28f325c2..b2b8c460 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -12,7 +12,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 ### `Fixed` -- [#383](https://github.com/nf-core/taxprofiler/pull/383) Update the module of KrakenUniq to the latest to account for edge case bugs where FASTQ input was mis-detected as wrong format (❤️ to @asafpr for reporting and solution, fixed by @LilyAnderssonLee) +- [#383](https://github.com/nf-core/taxprofiler/pull/383) Update the module of KrakenUniq to the latest to account for edge case bugs where FASTQ input was mis-detected as wrong format (❤️ to @asafpr for reporting and solution, fixed by @LilyAnderssonLee) -[#392](https://github.com/nf-core/taxprofiler/pull/392) Update the module of Taxpasta to support adding taxa information to results (❤️ to @SannaAb for reporting, fixed by @Midnighter) ### `Dependencies` diff --git a/modules.json b/modules.json index 25ffa0c1..9dc77080 100644 --- a/modules.json +++ b/modules.json @@ -234,12 +234,12 @@ }, "taxpasta/merge": { "branch": "master", - "git_sha": "7edce7d8425ebdf3975d22c2c4fe741d7b5dd899", + "git_sha": "48019785051ba491e82dce910273c2eca61bd5b7", "installed_by": ["modules"] }, "taxpasta/standardise": { "branch": "master", - "git_sha": "7edce7d8425ebdf3975d22c2c4fe741d7b5dd899", + "git_sha": "48019785051ba491e82dce910273c2eca61bd5b7", "installed_by": ["modules"] }, "untar": { diff --git a/modules/nf-core/taxpasta/merge/main.nf b/modules/nf-core/taxpasta/merge/main.nf index 59b40c15..de135221 100644 --- a/modules/nf-core/taxpasta/merge/main.nf +++ b/modules/nf-core/taxpasta/merge/main.nf @@ -2,10 +2,10 @@ process TAXPASTA_MERGE { tag "$meta.id" label 'process_single' - conda "bioconda::taxpasta=0.6.0" + conda "bioconda::taxpasta=0.6.1" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://depot.galaxyproject.org/singularity/taxpasta:0.6.0--pyhdfd78af_0': - 'biocontainers/taxpasta:0.6.0--pyhdfd78af_0' }" + 'https://depot.galaxyproject.org/singularity/taxpasta:0.6.1--pyhdfd78af_0': + 'biocontainers/taxpasta:0.6.1--pyhdfd78af_0' }" input: diff --git a/modules/nf-core/taxpasta/standardise/main.nf b/modules/nf-core/taxpasta/standardise/main.nf index 32402f00..7822912a 100644 --- a/modules/nf-core/taxpasta/standardise/main.nf +++ b/modules/nf-core/taxpasta/standardise/main.nf @@ -2,10 +2,10 @@ process TAXPASTA_STANDARDISE { tag "$meta.id" label 'process_single' - conda "bioconda::taxpasta=0.6.0" + conda "bioconda::taxpasta=0.6.1" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://depot.galaxyproject.org/singularity/taxpasta:0.6.0--pyhdfd78af_0': - 'biocontainers/taxpasta:0.6.0--pyhdfd78af_0' }" + 'https://depot.galaxyproject.org/singularity/taxpasta:0.6.1--pyhdfd78af_0': + 'biocontainers/taxpasta:0.6.1--pyhdfd78af_0' }" input: tuple val(meta), path(profile)