From a3dea866798dc18b5e88911b8d20103e05f9dbd1 Mon Sep 17 00:00:00 2001
From: Sofia Stamouli <sofia.stamouli@scilifelab.se>
Date: Mon, 14 Oct 2024 13:58:03 +0200
Subject: [PATCH] Use correct name of argument

---
 subworkflows/local/generate_downstream_samplesheets/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/subworkflows/local/generate_downstream_samplesheets/main.nf b/subworkflows/local/generate_downstream_samplesheets/main.nf
index a3cbf23b..b1499bd4 100644
--- a/subworkflows/local/generate_downstream_samplesheets/main.nf
+++ b/subworkflows/local/generate_downstream_samplesheets/main.nf
@@ -10,7 +10,7 @@ workflow GENERATE_DOWNSTREAM_SAMPLESHEETS {
     format     = 'csv' // most common format in nf-core
     format_sep = ','
 
-    if ( params.generate_pipeline_samplesheets == 'mag' && params.save_analysis_ready_reads ) {
+    if ( params.generate_pipeline_samplesheets == 'mag' && params.save_analysis_ready_fastqs ) {
         def fastq_rel_path = '/'
         format = 'csv'
         format_sep = ','