diff --git a/workflows/taxprofiler.nf b/workflows/taxprofiler.nf index 99e7f8a8..9c7157b2 100644 --- a/workflows/taxprofiler.nf +++ b/workflows/taxprofiler.nf @@ -17,7 +17,7 @@ WorkflowTaxprofiler.initialise(params, log) // Check input path parameters to see if they exist def checkPathParamList = [ params.input, params.genome, params.databases, - params.outdir, params.longread_hostremoval_index, + params.longread_hostremoval_index, params.hostremoval_reference, params.shortread_hostremoval_index, params.multiqc_config, params.shortread_qc_adapterlist, params.krona_taxonomy_directory,