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Add more supported PWM formats #2

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3 of 4 tasks
nictru opened this issue Apr 20, 2024 · 0 comments · Fixed by #6
Closed
3 of 4 tasks

Add more supported PWM formats #2

nictru opened this issue Apr 20, 2024 · 0 comments · Fixed by #6
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enhancement New feature or request

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nictru commented Apr 20, 2024

Description of feature

Currently only the PSEM (Position-specific energy motif) format is supported, which is not widely used. With the following conversion steps we could accept the more popular JASPAR and transfac formats and convert them into the PSEM and MEME format as needed. The MEME format will be necessary for SNEEP

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@nictru nictru added the enhancement New feature or request label Apr 20, 2024
@nictru nictru self-assigned this Apr 20, 2024
@nictru nictru linked a pull request Apr 26, 2024 that will close this issue
@nictru nictru closed this as completed in #6 May 30, 2024
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