diff --git a/.cache.tar.xz b/.cache.tar.xz
index 16540bafef..bd1805daf0 100644
Binary files a/.cache.tar.xz and b/.cache.tar.xz differ
diff --git a/public/components.json b/public/components.json
index 14d0ae6010..952fa76e50 100644
--- a/public/components.json
+++ b/public/components.json
@@ -447,7 +447,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "taxprofiler",
@@ -3799,7 +3799,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -5944,6 +5944,10 @@
           "name": "rnafusion",
           "version": "3.0.2"
         },
+        {
+          "name": "rnafusion",
+          "version": "3.0.2"
+        },
         {
           "name": "rnafusion",
           "version": "3.0.2"
@@ -9632,7 +9636,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "metatdenovo",
@@ -10615,7 +10619,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "viralrecon",
@@ -10957,7 +10961,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "phaseimpute",
@@ -12465,7 +12469,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "phaseimpute",
@@ -18914,6 +18918,14 @@
           "name": "genomeassembler",
           "version": "dev"
         },
+        {
+          "name": "pathogensurveillance",
+          "version": "dev"
+        },
+        {
+          "name": "genomeassembler",
+          "version": "dev"
+        },
         {
           "name": "pathogensurveillance",
           "version": "dev"
@@ -20978,7 +20990,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -23378,7 +23390,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "taxprofiler",
@@ -23469,7 +23481,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "taxprofiler",
@@ -23721,7 +23733,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -23838,7 +23850,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -27566,7 +27578,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -27662,7 +27674,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -27756,7 +27768,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -27846,7 +27858,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -27928,7 +27940,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -30189,10 +30201,6 @@
           "name": "isoseq",
           "version": "1.1.5"
         },
-        {
-          "name": "mag",
-          "version": "3.0.2"
-        },
         {
           "name": "magmap",
           "version": "dev"
@@ -30221,10 +30229,6 @@
           "name": "nanoseq",
           "version": "3.1.0"
         },
-        {
-          "name": "nanostring",
-          "version": "1.2.1"
-        },
         {
           "name": "nascent",
           "version": "2.2.0"
@@ -31397,7 +31401,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -31487,7 +31491,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -39142,7 +39146,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "nascent",
@@ -39378,7 +39382,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -41899,7 +41903,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "radseq",
@@ -56880,7 +56884,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "phageannotator",
@@ -57056,7 +57060,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "phageannotator",
@@ -62159,7 +62163,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -62401,7 +62405,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -62490,7 +62494,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -62583,7 +62587,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -62704,7 +62708,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -70062,6 +70066,10 @@
           "name": "isoseq",
           "version": "1.1.5"
         },
+        {
+          "name": "isoseq",
+          "version": "1.1.5"
+        },
         {
           "name": "isoseq",
           "version": "1.1.5"
@@ -73339,7 +73347,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "taxprofiler",
@@ -73690,7 +73698,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -73771,7 +73779,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "taxprofiler",
@@ -79881,7 +79889,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -81360,6 +81368,10 @@
           "name": "genomeassembler",
           "version": "dev"
         },
+        {
+          "name": "genomeassembler",
+          "version": "dev"
+        },
         {
           "name": "genomeassembler",
           "version": "dev"
@@ -81921,7 +81933,9 @@
               "description": "FastK based version of Merqury",
               "homepage": "https://github.com/thegenemyers/MERQURY.FK",
               "tool_dev_url": "https://github.com/thegenemyers/MERQURY.FK",
-              "licence": "https://github.com/thegenemyers/MERQURY.FK/blob/main/LICENSE"
+              "licence": [
+                "https://github.com/thegenemyers/MERQURY.FK/blob/main/LICENSE"
+              ]
             }
           }
         ],
@@ -81946,6 +81960,20 @@
               "pattern": "*.ktab*"
             }
           },
+          {
+            "matktab": {
+              "type": "file",
+              "description": "trio maternal histogram ktab files from the program FastK (option -t)",
+              "pattern": "*.ktab*"
+            }
+          },
+          {
+            "patktab": {
+              "type": "file",
+              "description": "trio paternal histogram ktab files from the program FastK (option -t)",
+              "pattern": "*.ktab*"
+            }
+          },
           {
             "assembly": {
               "type": "file",
@@ -81990,109 +82018,111 @@
             }
           },
           {
-            "spectra_cn_fl_png": {
+            "spectra_cn_fl": {
               "type": "file",
-              "description": "Unstacked copy number spectra filled plot in PNG format",
-              "pattern": "*.spectra-cn.fl.png"
+              "description": "Unstacked copy number spectra filled plot in PNG or PDF format",
+              "pattern": "*.spectra-cn.fl.{png,pdf}"
             }
           },
           {
-            "spectra_cn_ln_png": {
+            "spectra_cn_ln": {
               "type": "file",
-              "description": "Unstacked copy number spectra line plot in PNG format",
-              "pattern": "*.spectra-cn.ln.png"
+              "description": "Unstacked copy number spectra line plot in PNG or PDF format",
+              "pattern": "*.spectra-cn.ln.{png,pdf}"
             }
           },
           {
-            "spectra_cn_st_png": {
+            "spectra_cn_st": {
               "type": "file",
-              "description": "Stacked copy number spectra line plot in PNG format",
-              "pattern": "*.spectra-cn.st.png"
+              "description": "Stacked copy number spectra line plot in PNG or PDF format",
+              "pattern": "*.spectra-cn.st.{png,pdf}"
             }
           },
           {
-            "spectra_asm_fl_png": {
+            "spectra_asm_fl": {
               "type": "file",
-              "description": "Unstacked assembly spectra filled plot in PNG format",
-              "pattern": "*.spectra-asm.fl.png"
+              "description": "Unstacked assembly spectra filled plot in PNG or PDF format",
+              "pattern": "*.spectra-asm.fl.{png,pdf}"
             }
           },
           {
-            "spectra_asm_ln_png": {
+            "spectra_asm_ln": {
               "type": "file",
-              "description": "Unstacked assembly spectra line plot in PNG format",
-              "pattern": "*.spectra-asm.ln.png"
+              "description": "Unstacked assembly spectra line plot in PNG or PDF format",
+              "pattern": "*.spectra-asm.ln.{png,pdf}"
             }
           },
           {
-            "spectra_asm_st_png": {
+            "spectra_asm_st": {
               "type": "file",
-              "description": "Stacked assembly spectra line plot in PNG format",
-              "pattern": "*.spectra-asm.st.png"
+              "description": "Stacked assembly spectra line plot in PNG or PDF format",
+              "pattern": "*.spectra-asm.st.{png,pdf}"
             }
           },
           {
-            "spectra_cn_fl_pdf": {
+            "assembly_qv": {
               "type": "file",
-              "description": "Unstacked copy number spectra filled plot in PDF format",
-              "pattern": "*.spectra-cn.fl.pdf"
+              "description": "error and qv table for each scaffold of the assembly",
+              "pattern": "*.qv"
             }
           },
           {
-            "spectra_cn_ln_pdf": {
+            "qv": {
               "type": "file",
-              "description": "Unstacked copy number spectra line plot in PDF format",
-              "pattern": "*.spectra-cn.ln.pdf"
+              "description": "error and qv of each assembly as a whole",
+              "pattern": "*.qv"
             }
           },
           {
-            "spectra_cn_st_pdf": {
+            "phased_block_bed": {
               "type": "file",
-              "description": "Stacked copy number spectra line plot in PDF format",
-              "pattern": "*.spectra-cn.st.pdf"
+              "description": "Assembly kmer positions seperated by block in bed format",
+              "pattern": "*.phased.block.bed"
             }
           },
           {
-            "spectra_asm_fl_pdf": {
+            "phased_block_stats": {
               "type": "file",
-              "description": "Unstacked assembly spectra filled plot in PDF format",
-              "pattern": "*.spectra-asm.fl.pdf"
+              "description": "phased assembly statistics file",
+              "pattern": "*.phased.block.stats"
             }
           },
           {
-            "spectra_asm_ln_pdf": {
+            "continuity_N": {
               "type": "file",
-              "description": "Unstacked assembly spectra line plot in PDF format",
-              "pattern": "*.spectra-asm.ln.pdf"
+              "description": "Stacked assembly N continuity plot in PNG or PDF format",
+              "pattern": "*.continuity.N.{png,pdf}"
             }
           },
           {
-            "spectra_asm_st_pdf": {
+            "block_N": {
               "type": "file",
-              "description": "Stacked assembly spectra line plot in PDF format",
-              "pattern": "*.spectra-asm.st.pdf"
+              "description": "Stacked assembly N continuity by block plot in PNG or PDF format",
+              "pattern": "*.block.N.{png,pdf}"
             }
           },
           {
-            "assembly_qv": {
+            "block_blob": {
               "type": "file",
-              "description": "error and qv table for each scaffold of the assembly",
-              "pattern": "*.qv"
+              "description": "Stacked assembly block plot in PNG or PDF format",
+              "pattern": "*.block.blob.{png,pdf}"
             }
           },
           {
-            "qv": {
+            "hapmers_blob": {
               "type": "file",
-              "description": "error and qv of each assembly as a whole",
-              "pattern": "*.qv"
+              "description": "Stacked assembly hapmers block plot in PNG or PDF format",
+              "pattern": "*.hapmers.blob.{png,pdf}"
             }
           }
         ],
         "authors": [
-          "@mahesh-panchal"
+          "@mahesh-panchal",
+          "@yumisims"
         ],
         "maintainers": [
-          "@mahesh-panchal"
+          "@mahesh-panchal",
+          "@yumisims"
         ]
       },
       "pipelines": [
@@ -82548,7 +82578,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -82665,7 +82695,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -82767,7 +82797,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -83349,7 +83379,7 @@
             }
           },
           {
-            "metaphlan_db": {
+            "metaphlan_db_latest": {
               "type": "file",
               "description": "Directory containing pre-downloaded and uncompressed MetaPhlAn database downloaded from: http://cmprod1.cibio.unitn.it/biobakery4/metaphlan_databases/.\nNote that you will also need to specify `--index` and the database version name (e.g. 'mpa_vJan21_TOY_CHOCOPhlAnSGB_202103') in your module.conf ext.args for METAPHLAN_METAPHLAN!\n",
               "pattern": "*/"
@@ -83385,7 +83415,7 @@
             }
           },
           {
-            "bowtie2out": {
+            "bt2out": {
               "type": "file",
               "description": "Intermediate Bowtie2 output produced from mapping the metagenome against the MetaPHlAn marker database ( not compatible with `bowtie2out` files generated with MetaPhlAn versions below 3 )",
               "pattern": "*.{bowtie2out.txt}"
@@ -85234,7 +85264,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -87470,7 +87500,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -87514,7 +87544,7 @@
         },
         {
           "name": "nanostring",
-          "version": "1.2.1"
+          "version": "1.3.0"
         },
         {
           "name": "nascent",
@@ -88655,7 +88685,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "nanoseq",
@@ -88900,7 +88930,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "nanoseq",
@@ -102263,7 +102293,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "taxprofiler",
@@ -102839,7 +102869,9 @@
               "documentation": "https://github.com/Adrian-Cantu/PRINSEQ-plus-plus",
               "tool_dev_url": "https://github.com/Adrian-Cantu/PRINSEQ-plus-plus",
               "doi": "10.7287/peerj.preprints.27553v1",
-              "licence": "['GPL v2']"
+              "licence": [
+                "GPL v2"
+              ]
             }
           }
         ],
@@ -103017,7 +103049,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "metapep",
@@ -103196,7 +103228,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "magmap",
@@ -103860,7 +103892,9 @@
               "documentation": "https://pureclip.readthedocs.io/en/latest/GettingStarted/index.html",
               "tool_dev_url": "https://github.com/skrakau/PureCLIP",
               "doi": "10.1186/s13059-017-1364-2",
-              "licence": "['GPL v3']"
+              "licence": [
+                "GPL v3"
+              ]
             }
           }
         ],
@@ -105097,7 +105131,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -105182,7 +105216,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         }
       ]
     },
@@ -110106,7 +110140,9 @@
               "homepage": "https://github.com/maxibor/sam2lca",
               "documentation": "https://sam2lca.readthedocs.io",
               "doi": "10.21105/joss.04360",
-              "licence": "['GPL v3']"
+              "licence": [
+                "GPL v3"
+              ]
             }
           }
         ],
@@ -111624,7 +111660,7 @@
         },
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "methylseq",
@@ -114362,7 +114398,9 @@
               "homepage": "https://github.com/GeneDx/scramble",
               "documentation": "https://github.com/GeneDx/scramble",
               "tool_dev_url": "https://github.com/GeneDx/scramble",
-              "licence": "['CC']"
+              "licence": [
+                "CC"
+              ]
             }
           }
         ],
@@ -114648,7 +114686,9 @@
               "homepage": "https://www.bioinf.uni-leipzig.de/Software/segemehl/",
               "documentation": "https://www.bioinf.uni-leipzig.de/Software/segemehl/",
               "doi": "10.1186/gb-2014-15-2-r34",
-              "licence": "GPL v3"
+              "licence": [
+                "GPL v3"
+              ]
             }
           }
         ],
@@ -118692,7 +118732,7 @@
       "pipelines": [
         {
           "name": "mag",
-          "version": "3.0.2"
+          "version": "3.0.3"
         },
         {
           "name": "metatdenovo",
@@ -119466,7 +119506,9 @@
               "documentation": "https://sanger-pathogens.github.io/seroba/",
               "tool_dev_url": "https://github.com/sanger-pathogens/seroba",
               "doi": "10.1099/mgen.0.000186",
-              "licence": "['GPL v3']"
+              "licence": [
+                "GPL v3"
+              ]
             }
           }
         ],
@@ -120556,7 +120598,9 @@
               "documentation": "https://github.com/CFSAN-Biostatistics/shigatyper",
               "tool_dev_url": "https://github.com/CFSAN-Biostatistics/shigatyper",
               "doi": "10.1128/AEM.00165-19",
-              "licence": "['Public Domain']"
+              "licence": [
+                "Public Domain"
+              ]
             }
           }
         ],
@@ -121765,7 +121809,11 @@
         "name": "smncopynumbercaller",
         "description": "tool to call the copy number of full-length SMN1, full-length SMN2, as well as SMN2Δ7–8 (SMN2 with a deletion of Exon7-8) from a whole-genome sequencing (WGS) BAM file.",
         "keywords": [
-          "copy number, BAM, CRAM, SMN1, SMN2"
+          "copy number",
+          "BAM",
+          "CRAM",
+          "SMN1",
+          "SMN2"
         ],
         "tools": [
           {
@@ -121775,7 +121823,9 @@
               "documentation": "https://github.com/Illumina/SMNCopyNumberCaller",
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