From d349ef3fcfa1d825279b99aee6355be7edb5f899 Mon Sep 17 00:00:00 2001 From: Richel Bilderbeek Date: Mon, 17 Apr 2023 09:22:41 +0200 Subject: [PATCH 1/2] Link to how to install nf-core I felt it was unexpected that this first `nf-core` installation instruction (i.e. at `https://nf-co.re/docs/usage/installation`) does not share how to install `nf-core`. I suggest to link to it. --- markdown/usage/installation.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/markdown/usage/installation.md b/markdown/usage/installation.md index 9fe886efca..223eb81df2 100644 --- a/markdown/usage/installation.md +++ b/markdown/usage/installation.md @@ -9,7 +9,7 @@ menu: ## Nextflow All nf-core pipelines use Nextflow, so this must be installed on the system where you launch your analysis. -See [nextflow.io](https://www.nextflow.io/docs/latest/getstarted.html#installation) for the latest installation instructions. Once installed, see [_Nextflow configuration_](configuration.md) to set up Nextflow to run on your system. +See [nextflow.io](https://www.nextflow.io/docs/latest/getstarted.html#installation) for the latest installation instructions. Once installed, see [_Nextflow configuration_](configuration.md) to set up Nextflow to run on your system. To install `nf-core` afterwards, follow [these instructions](https://nf-co.re/tools/#installation). ### Typical installation From ff5cb1731703129d31d37c90ff897fceae8b85c0 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=BAlia=20Mir=20Pedrol?= Date: Thu, 6 Jul 2023 10:31:43 +0200 Subject: [PATCH 2/2] Update markdown/usage/installation.md Co-authored-by: Phil Ewels --- markdown/usage/installation.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/markdown/usage/installation.md b/markdown/usage/installation.md index 223eb81df2..d2180cf5d2 100644 --- a/markdown/usage/installation.md +++ b/markdown/usage/installation.md @@ -9,7 +9,9 @@ menu: ## Nextflow All nf-core pipelines use Nextflow, so this must be installed on the system where you launch your analysis. -See [nextflow.io](https://www.nextflow.io/docs/latest/getstarted.html#installation) for the latest installation instructions. Once installed, see [_Nextflow configuration_](configuration.md) to set up Nextflow to run on your system. To install `nf-core` afterwards, follow [these instructions](https://nf-co.re/tools/#installation). +See [nextflow.io](https://www.nextflow.io/docs/latest/getstarted.html#installation) for the latest installation instructions. Once installed, see [_Nextflow configuration_](configuration.md) to set up Nextflow to run on your system. + +> **Note**: You don't need to install the `nf-core` command line tools to run nf-core pipelines, you only need Nextflow. They can help with certain things though. Installation instructions for those are further down.. ### Typical installation