forked from micro-manager/micro-manager
-
Notifications
You must be signed in to change notification settings - Fork 11
252 lines (220 loc) · 7.53 KB
/
apidoc.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
name: apidoc
on:
pull_request:
push:
branches:
- main
jobs:
mmdevice-doxygen:
name: MMDevice Doxygen
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
with:
path: micro-manager
submodules: true
- name: Install Doxygen
run: |
sudo apt-get update
sudo apt-get -y install doxygen
- name: Build HTML
run: |
cd micro-manager
mkdir -p doxygen/out/MMDevice
doxygen doxygen/MMDevice
tar cf ../html.tar -C doxygen/out/MMDevice/html .
- uses: actions/checkout@v2
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
with:
repository: micro-manager/apidoc
ssh-key: ${{ secrets.SSH_KEY_DEPLOY_TO_APIDOC }}
fetch-depth: 0
path: apidoc
- name: Publish HTML
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
run: |
cd apidoc
./prepare_pages_branch.sh MMDevice/latest
tar xf ../html.tar
git add .
./publish_pages_as_bot.sh MMDevice/latest
mmcore-doxygen:
name: MMCore Doxygen
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
with:
path: micro-manager
submodules: true
- name: Install Doxygen
run: |
sudo apt-get update
sudo apt-get -y install doxygen
- name: Build HTML
run: |
cd micro-manager
mkdir -p doxygen/out/MMCore
doxygen doxygen/MMCore
tar cf ../html.tar -C doxygen/out/MMCore/html .
- uses: actions/checkout@v2
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
with:
repository: micro-manager/apidoc
ssh-key: ${{ secrets.SSH_KEY_DEPLOY_TO_APIDOC }}
fetch-depth: 0
path: apidoc
- name: Publish HTML
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
run: |
cd apidoc
./prepare_pages_branch.sh MMCore/latest
tar xf ../html.tar
git add .
./publish_pages_as_bot.sh MMCore/latest
mmcorej-javadoc:
name: mmcorej Javadoc
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
with:
path: micro-manager
submodules: true
- name: Install tools and dependencies
run: |
sudo apt-get update
sudo apt-get -y install build-essential autoconf automake libtool \
autoconf-archive pkg-config doxygen
sudo apt-get -y install libpcre3-dev # For SWIG-3
- name: Cache SWIG-3
id: cache-swig-3
uses: actions/cache@v4
with:
path: swig-3.0.12
key: mmstudio-javadoc-swig-3.0.12
- name: Build SWIG-3
if: steps.cache-swig-3.outputs.cache-hit != 'true'
run: |
curl -LO http://prdownloads.sourceforge.net/swig/swig-3.0.12.tar.gz
tar xzf swig-3.0.12.tar.gz
cd swig-3.0.12
./configure
make -j3
- name: Install SWIG-3
run: |
cd swig-3.0.12
sudo make install
- name: Configure and run SWIG
run: |
cd micro-manager
./autogen.sh
./configure JAVA_HOME=$JAVA_HOME_8_X64
make -C mmCoreAndDevices/MMCoreJ_wrap MMCoreJ_wrap.h
- name: Build Javadoc
run: |
cd micro-manager
make dox
cd swig-doc-converter
PATH="$JAVA_HOME_8_X64/bin:$PATH" ./convert
tar cf ../../html.tar -C javadoc .
- uses: actions/checkout@v2
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
with:
repository: micro-manager/apidoc
ssh-key: ${{ secrets.SSH_KEY_DEPLOY_TO_APIDOC }}
fetch-depth: 0
path: apidoc
- name: Publish Javadoc
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
run: |
cd apidoc
./prepare_pages_branch.sh mmcorej/latest
tar xf ../html.tar
git add .
./publish_pages_as_bot.sh mmcorej/latest
mmstudio-javadoc:
name: mmstudio Javadoc
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
with:
path: micro-manager
submodules: true
- name: Install tools and dependencies
run: |
sudo apt-get update
sudo apt-get -y install build-essential autoconf automake libtool \
autoconf-archive pkg-config
sudo apt-get -y install libboost-all-dev
sudo apt-get -y install libpcre3-dev # For SWIG-3
sudo apt-get -y install subversion
- name: Cache SWIG-3
id: cache-swig-3
uses: actions/cache@v4
with:
path: swig-3.0.12
key: mmstudio-javadoc-swig-3.0.12
- name: Build SWIG-3
if: steps.cache-swig-3.outputs.cache-hit != 'true'
run: |
curl -LO http://prdownloads.sourceforge.net/swig/swig-3.0.12.tar.gz
tar xzf swig-3.0.12.tar.gz
cd swig-3.0.12
./configure
make -j3
- name: Install SWIG-3
run: |
cd swig-3.0.12
sudo make install
- name: Cache 3rdpartypublic classext
id: cache-3ppce
uses: actions/cache@v4
with:
path: 3rdpartypublic
key: mmstudio-javadoc-3ppce-${{ hashFiles('micro-manager/buildscripts/ivy.xml') }}
- name: Check out 3rdpartypublic classext
if: steps.cache-3ppce.outputs.cache-hit != 'true'
run: |
# TEMPORARY HACK to accept specific expired TLS certificate
mkdir -p ~/.subversion/auth/svn.ssl.server
cp micro-manager/.github/accept-expired-valelab4-svn \
~/.subversion/auth/svn.ssl.server/7abd63f9a2ebe9418dc77976036ea792
# END TEMPORARY HACK
mkdir 3rdpartypublic
svn co https://valelab4.ucsf.edu/svn/3rdpartypublic/classext \
3rdpartypublic/classext
- name: Cache Ivy cache
uses: actions/cache@v4
with:
path: ~/.ivy2
key: mmstudio-javadoc-ivy-${{ hashFiles('micro-manager/buildscripts/ivy*.xml') }}
- name: Build parts of micro-manager
run: |
cd micro-manager
./autogen.sh
./configure JAVA_HOME=$JAVA_HOME_8_X64
make fetchdeps
make -C buildscripts/AntExtensions
make -C mmCoreAndDevices/MMDevice -j3
make -C mmCoreAndDevices/MMCore -j3
make -C mmCoreAndDevices/MMCoreJ_wrap
make -C mmstudio
- name: Build Javadoc
run: |
cd micro-manager/mmstudio
PATH="$JAVA_HOME_8_X64/bin:$PATH" make javadoc
tar cf ../../html.tar -C doc .
- uses: actions/checkout@v2
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
with:
repository: micro-manager/apidoc
ssh-key: ${{ secrets.SSH_KEY_DEPLOY_TO_APIDOC }}
fetch-depth: 0
path: apidoc
- name: Publish Javadoc
if: github.repository == 'micro-manager/micro-manager' && github.ref == 'refs/heads/main'
run: |
cd apidoc
./prepare_pages_branch.sh mmstudio/latest
tar xf ../html.tar
git add .
./publish_pages_as_bot.sh mmstudio/latest