#
"""Plotting tools shared across MRIQC and fMRIPrep."""
-import matplotlib.cm as cm
import matplotlib.pyplot as plt
import nibabel as nb
import numpy as np
import pandas as pd
-from matplotlib import colormaps
+from matplotlib import cm, colormaps
from matplotlib import gridspec as mgs
from matplotlib.colorbar import ColorbarBase
from matplotlib.colors import Normalize
diff --git a/master/api/niworkflows-anat-ants-1.pdf b/master/api/niworkflows-anat-ants-1.pdf
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diff --git a/master/api/niworkflows-anat-coregistration-1.pdf b/master/api/niworkflows-anat-coregistration-1.pdf
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diff --git a/master/api/niworkflows-anat-freesurfer-1.pdf b/master/api/niworkflows-anat-freesurfer-1.pdf
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diff --git a/master/api/niworkflows-anat-skullstrip-1.pdf b/master/api/niworkflows-anat-skullstrip-1.pdf
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diff --git a/master/api/niworkflows-func-util-1.pdf b/master/api/niworkflows-func-util-1.pdf
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diff --git a/master/api/niworkflows-func-util-2.pdf b/master/api/niworkflows-func-util-2.pdf
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diff --git a/master/api/niworkflows-func-util-3.pdf b/master/api/niworkflows-func-util-3.pdf
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diff --git a/master/api/niworkflows-workflows-epi-refmap-1.pdf b/master/api/niworkflows-workflows-epi-refmap-1.pdf
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diff --git a/master/api/niworkflows.interfaces.confounds.html b/master/api/niworkflows.interfaces.confounds.html
index da55178d993..84eaad2b5d8 100644
--- a/master/api/niworkflows.interfaces.confounds.html
+++ b/master/api/niworkflows.interfaces.confounds.html
@@ -450,14 +450,14 @@
indicates that the first and second exponential terms should be added.
To retain the original terms, 1 must be included in the list.
variables (list of str) – List of variables for which exponential terms should be computed.
data (DataFrame) – Table of values of all observations of all variables.
data (DataFrame) – Table of values of all observations of all variables.
variables_exp (list) – A list of variables to include in the final data frame after adding
the specified exponential terms.
data_exp (DataFrame) – Table of values of all observations of all variables, including any
+
data_exp (DataFrame) – Table of values of all observations of all variables, including any
specified exponential terms.
Temporal derivatives and exponential terms are computed for all terms in the grouping symbols that they adjoin.
-parent_data (DataFrame) – A tabulation of all values usable in the model formula. Each additive
+
parent_data (DataFrame) – A tabulation of all values usable in the model formula. Each additive
term in model_formula should correspond either to a variable in this
data frame or to instructions for operating on a variable (for
instance, computing temporal derivatives or exponential terms).
data (DataFrame) – A tabulation of observations from which spike regressors should be
+
data (DataFrame) – A tabulation of observations from which spike regressors should be
estimated.
criteria (dict of (str, '>' or '<' or float)) – Criteria for generating a spike regressor. If, for a given frame, the
value of the variable corresponding to the key exceeds the threshold
@@ -575,7 +575,7 @@
data – The input DataFrame with a column for each spike regressor.
References
@@ -601,14 +601,14 @@ To retain the original terms,0 must be included in the list.
variables (list of str) – List of variables for which temporal derivative terms should be
computed.
data (DataFrame) – Table of values of all observations of all variables.
data (DataFrame) – Table of values of all observations of all variables.
variables_deriv (list) – A list of variables to include in the final data frame after adding
the specified derivative terms.
data_deriv (DataFrame) – Table of values of all observations of all variables, including any
+
data_deriv (DataFrame) – Table of values of all observations of all variables, including any
specified derivative terms.