TADrun.sh question #1
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Mojy,
Those are the input parameters for TADcalc_mp.py . Please look at the
python code to see if it is clear.
-Rachel
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…On Tue, Jun 27, 2023 at 8:36 AM Mojy ***@***.***> wrote:
@LiujuanRachelTang <https://github.com/LiujuanRachelTang>
What are those $SLURM_ARRAY_TASK_ID $SLURM_ARRAY_TASK_COUNT in the
following lines at TADrun.sh?
echo "host name is hostname : $SLURM_ARRAY_TASK_ID
$SLURM_ARRAY_TASK_COUNT ../fort.63.nc"
cp ../TXstabilize/fort.63.nc tt/${SLURM_ARRAY_TASK_ID}.nc
./TADcalc_mp.py $SLURM_ARRAY_TASK_ID $SLURM_ARRAY_TASK_COUNT tt/$
{SLURM_ARRAY_TASK_ID}.nc
date
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I am not sure. On TADcalc_mp.py, line 12, # call as TADcalc_mp.py TASK_ID TASK_COUNT filename |
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Mojy,
I suggest trying to run an example with fort.63.nc first. You may use
Elena's fort.63.nc since its size is much smaller than my Alaska output.
In this way, it helps better understand how it works.
…-Rachel
On Tue, Jun 27, 2023 at 9:33 AM Mojy ***@***.***> wrote:
I am not sure. On TADcalc_mp.py, line 12, # call as TADcalc_mp.py TASK_ID
TASK_COUNT filename
Does it mean that those *TASK_ID* and *TASK_COUNT* should be defined at
TADrun.sh?
@Delta-function <https://github.com/Delta-function>: could you please
provide an example?
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@Delta-function, Could you please send me the link for one of your fort.63.nc. I need to see how these three scripts work. |
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@LiujuanRachelTang @Delta-function
What are those $SLURM_ARRAY_TASK_ID $SLURM_ARRAY_TASK_COUNT in the following lines at TADrun.sh?
echo "host name is$SLURM_ARRAY_TASK_COUNT tt/$ {SLURM_ARRAY_TASK_ID}.nc
hostname: $SLURM_ARRAY_TASK_ID $SLURM_ARRAY_TASK_COUNT ../fort.63.nc"cp ../TXstabilize/fort.63.nc tt/${SLURM_ARRAY_TASK_ID}.nc
./TADcalc_mp.py $SLURM_ARRAY_TASK_ID
date
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