diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index 290ca9187..99bb08209 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -22,4 +22,4 @@ jobs:
             - name: toolkit check pr
               shell: nu {0}
               run: |
-                  nu -c 'use toolkit.nu *; check pr --and-exit'
+                  nu --commands 'use toolkit.nu *; check pr --and-exit'
diff --git a/.github/workflows/daily.yml b/.github/workflows/daily.yml
index 366cc6b6c..9c1911e60 100644
--- a/.github/workflows/daily.yml
+++ b/.github/workflows/daily.yml
@@ -1,9 +1,9 @@
 on:
     push:
-        branches: 
+        branches:
             - main
     schedule:
-      - cron: '30 0 * * *' # every day at 00:30 AM UTC
+        - cron: "30 0 * * *" # every day at 00:30 AM UTC
 
 env:
     NUSHELL_CARGO_PROFILE: ci
@@ -15,19 +15,15 @@ jobs:
 
         steps:
             - uses: actions/checkout@v4
-            - name: 'Fetch main branch'
+            - name: "Fetch main branch"
               run: |
-                git fetch origin main --depth 1
+                  git fetch origin main --depth 1
             - uses: hustcer/setup-nu@v3.9
               with:
-                version: '*'
-                check-latest: true
-                features: full # dataframe and extra included
-            - name: toolkit generate-file-list --full
+                  version: "*"
+                  check-latest: true
+                  features: full # dataframe and extra included
+            - name: toolkit check pr --full
               shell: nu {0}
               run: |
-                nu -c "use toolkit.nu *; generate-file-list --full"
-            - name: run nu-check on all files
-              shell: nu {0}
-              run: |
-                nu ./check-files.nu
+                  nu --commands 'use toolkit.nu *; check pr --full --and-exit'
diff --git a/toolkit.nu b/toolkit.nu
index 0edbd497f..a24445ae7 100644
--- a/toolkit.nu
+++ b/toolkit.nu
@@ -71,7 +71,7 @@ export def "lint ide-check" []: path -> int {
     let file = $in
     let stub = $env.STUB_IDE_CHECK? | default false | into bool
     let diagnostics = if $stub {
-        do { nu -n -c $"use '($file)'" }
+        do { nu --no-config-file --commands $"use '($file)'" }
             | complete
             | [[severity message]; [$in.exit_code $in.stderr]]
             | where severity != 0