python crashes when writing start.xx

[srio]

chac:~/Oasys/OASYS_VE % python
Python 3.4.0 (default, Jun 19 2015, 14:20:21) 
[GCC 4.8.2] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import Shadow
>>> oe = Shadow.OE()
>>> oe.FILE_REFL=b'aaaaaaaaaaaaa'
>>> oe.write("tmp.01")
fixing poolOE for Fortran
fixed poolOE for Fortran
>>> oe.load("tmp.01")
...
7ffddc745000-7ffddc747000 r--p 00000000 00:00 0                          [vvar]
7ffddc747000-7ffddc749000 r-xp 00000000 00:00 0                          [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]
Aborted (core dumped)

[srio]

Does not happen in Mac.

Same code with old setup.py is OK => Problem of new setup.py...
Check compilation/link flags. This is OK:

chac:~/tmp/shadow3 % make lib
./shadow_version.sh gfortran
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_version.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_globaldefinitions.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c stringio.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c gfile.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_beamio.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_math.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_variables.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_roughness.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_kernel.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_synchrotron.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_pre_sync.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_pre_sync_urgent.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_preprocessors.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_postprocessors.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_bind_f.f90
gfortran -cpp -fPIC -ffree-line-length-none  -static -O2 -fomit-frame-pointer -D_COMPILE4NIX -c shadow_crl.f90
gcc -fPIC    -c -o shadow_bind_c.o shadow_bind_c.c
gfortran -shared -lm  -fPIC  -o libshadow3.so shadow_version.o shadow_globaldefinitions.o stringio.o gfile.o shadow_beamio.o shadow_math.o shadow_variables.o shadow_roughness.o shadow_kernel.o shadow_synchrotron.o shadow_pre_sync.o shadow_pre_sync_urgent.o shadow_preprocessors.o shadow_postprocessors.o shadow_bind_f.o shadow_crl.o
gcc -shared -lm  -fPIC  -o libshadow3c.so shadow_bind_c.o -L. -lshadow3 #shadow_version.o shadow_globaldefinitions.o stringio.o gfile.o shadow_beamio.o shadow_math.o shadow_variables.o shadow_roughness.o shadow_kernel.o shadow_synchrotron.o shadow_pre_sync.o shadow_pre_sync_urgent.o shadow_preprocessors.o shadow_postprocessors.o shadow_bind_f.o shadow_crl.o
chac:~/tmp/shadow3 % 

and now python:

chac:~/tmp/shadow3 % python setup.py build
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.4
creating build/lib.linux-x86_64-3.4/Shadow
copying ./trace3_py.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./ShadowSrw.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./__init__.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./ShadowPreprocessorsXraylib.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./example_tolerances.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./ShadowTools.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./ShadowToolsPrivate.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./ShadowLibExtensions.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./srwlib_fake.py -> build/lib.linux-x86_64-3.4/Shadow
copying ./SRW2SHADOW_Example01.py -> build/lib.linux-x86_64-3.4/Shadow
running build_ext
building 'Shadow.ShadowLib' extension
creating build/temp.linux-x86_64-3.4
x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/local/lib/python3.4/dist-packages/numpy/core/include -I/usr/include/python3.4m -I/users/srio/tmp/test1env/include/python3.4m -c shadow_bind_python.c -o build/temp.linux-x86_64-3.4/shadow_bind_python.o -msse -msse2
In file included from /usr/local/lib/python3.4/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1804:0,
                 from /usr/local/lib/python3.4/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/local/lib/python3.4/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from shadow_bind_python.h:25,
                 from shadow_bind_python.c:1:
/usr/local/lib/python3.4/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.4/shadow_bind_python.o -L. -lshadow3 -lshadow3c -o build/lib.linux-x86_64-3.4/Shadow/ShadowLib.cpython-34m.so -msse -msse2
chac:~/tmp/shadow3 % 

[srio]

Problem is still not solved. This script crashes python in Windows:

import Shadow
beam = Shadow.Beam()
source = Shadow.Source()
source.write('foo.txt')
beam.genSource(source)

This problem is probably not going to be solved. Not applicable to new shadow4.