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Add simple SOPs for updating imports to CL doc #1749

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dosumis opened this issue Nov 24, 2022 · 2 comments
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Add simple SOPs for updating imports to CL doc #1749

dosumis opened this issue Nov 24, 2022 · 2 comments
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documentation Issues related to management of CL's documentation, in the top level docs and elsewhere. Stale

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@dosumis
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dosumis commented Nov 24, 2022

In discussion with @bvarner-ebi it has become clear that the general oBook documentation on imports does not work well as a guide for updating imports no CL. Users need to know beforehand what strategy is used for imports and the guide (apparently) lacks the fine grained detail needed to successfully run the pipeline for CL. In addition, some imports (e.g. PR) need to be treated differently because of the size of the upstream ontology.

This thread illustrates the problem well - and has the beginnings of a more workable SOP for CL imports.

TODO I propose that @bvarner-ebi write a short draft SOP for inclusion in CL doc. @anitacaron and @shawntanzk can review before incorporating into the standard auto-generated doc.

Big picture: Centralised documentation in the oBook is great, but generalisation comes at a cost to usability. I think local SOPs for ontologies are therefore unavoidable. We also need them ASAP for new curators.

@dosumis dosumis added the documentation Issues related to management of CL's documentation, in the top level docs and elsewhere. label Nov 24, 2022
@dosumis dosumis assigned ghost Nov 24, 2022
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This issue has not seen any activity in the past 6 months; it will be closed automatically in one year from now if no action is taken.

@github-actions github-actions bot added the Stale label May 24, 2023
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ghost commented Oct 18, 2023

@ghost ghost closed this as completed Oct 18, 2023
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Labels
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