Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix the default namespace declared in OBO header #54

Open
althonos opened this issue Feb 28, 2024 · 0 comments
Open

Fix the default namespace declared in OBO header #54

althonos opened this issue Feb 28, 2024 · 0 comments

Comments

@althonos
Copy link

Hi!

The OBO 1.4 format mandates that the OBO namespaces used in OBO files are identifiers, not free text, so you should change the default namespace declared in the header from:

default-namespace: Dicty Phenotypes

to

default-namespace: dicty_phenotype

I don't think you are using namespaces to separate the ontology into fragments, so that's shouldn't affect anything else, but this is all that's needed to make ddpheno compliant with the OBO 1.4 syntax.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant