From 4fbaa3f02c6bd8ed1a138fc374c7e6d893a4ad0e Mon Sep 17 00:00:00 2001
From: Aleix Puig <94959119+aleixpuigb@users.noreply.github.com>
Date: Thu, 18 Apr 2024 16:18:22 +0100
Subject: [PATCH] Fixes #3258 substitute obsoleted GO term 'reproduction'
 (#3259)

Fixes #3258 substitute obsoleted GO term 'reproduction'
---
 src/ontology/uberon-edit.obo | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo
index c3d358ecc..17fb18557 100644
--- a/src/ontology/uberon-edit.obo
+++ b/src/ontology/uberon-edit.obo
@@ -9904,7 +9904,7 @@ xref: XAO:0000142
 xref: ZFA:0000632
 is_a: UBERON:0000467 ! anatomical system
 intersection_of: UBERON:0000467 ! anatomical system
-intersection_of: capable_of_part_of GO:0000003 ! reproduction
+intersection_of: capable_of_part_of GO:0022414 ! reproductive process
 disjoint_from: UBERON:0001004 ! respiratory system
 disjoint_from: UBERON:0001007 ! digestive system
 disjoint_from: UBERON:0001009 ! circulatory system
@@ -67550,7 +67550,7 @@ xref: UMLS:C0017420 {source="ncithesaurus:Genitalia"}
 xref: WBbt:0008422
 is_a: UBERON:0000062 ! organ
 intersection_of: UBERON:0000062 ! organ
-intersection_of: capable_of_part_of GO:0000003 ! reproduction
+intersection_of: capable_of_part_of GO:0022414 ! reproductive process
 relationship: part_of UBERON:0000990 ! reproductive system
 property_value: external_ontology_notes "GO uses genitalia for the singular organ" xsd:string {external_ontology="GO"}
 
@@ -117761,7 +117761,7 @@ xref: EMAPA:37903 {source="MA:th"}
 xref: FMA:67798
 intersection_of: UBERON:0000420 ! myoepithelium
 intersection_of: part_of UBERON:0001911 ! mammary gland
-relationship: has_part CL:0002324 ! myoepithelial cell of mammary gland
+relationship: has_part CL:0002324 ! basal-myoepithelial cell of mammary gland
 property_value: structure_notes "The cells of this structure are specialized epithelial cells that express smooth muscle-specific contractile and cytoskeletal properties; during lactation, MECs contract in response to oxytocin to generate the contractile force required for milk ejection; MECs are involved in all developmental stages of mammary gland morphogenesis, modulating proliferation and differentiation of luminal cells; they take part in the formation of extracellular matrix, synthesizing its components and secreting proteinases and their inhibitors; in addition, MECs are regarded as natural cancer suppressors: they secrete suppressor proteins limiting cancer growth, invasiveness, and neoangiogenesis; MECs are markedly resistant to malignant transformation and they are able to suppress the transformation of neighboring luminal cells[MP]" xsd:string
 
 [Term]
@@ -154687,7 +154687,7 @@ relationship: present_in_taxon NCBITaxon:37887 ! Notoryctes
 relationship: present_in_taxon NCBITaxon:38624 ! Phascolarctidae
 relationship: present_in_taxon NCBITaxon:9255 ! Monotremata
 relationship: present_in_taxon NCBITaxon:9265 ! Didelphidae
-relationship: present_in_taxon NCBITaxon:9322
+relationship: present_in_taxon NCBITaxon:9322 ! Macropus sp.
 relationship: present_in_taxon NCBITaxon:9338 ! Vombatidae
 relationship: present_in_taxon NCBITaxon:9363 ! Erinaceidae
 relationship: present_in_taxon NCBITaxon:9369 ! Tenrecidae