Clarify the intent of the DPs

[cmungall]

Should the DPs be consolidated in the Uberon repo?

Having said that I am likely lacking a lot of context about vccfo

E.g. I am looking at vessel

DP:

https://github.com/obophenotype/vccf-ontology/blob/main/src/patterns/dosdp-patterns/vessel.yaml

Data:

https://github.com/obophenotype/vccf-ontology/blob/main/src/patterns/data/default/vessel.tsv

This doesn't really conform to how we might do it in uberon.

E.g. if I see

def:
  text: "A vessel located in %s"

I expect a logical definition too

see principle S11 from DefinitionConstraintComponent

However, I don't think that's the purpose of this DP. I think this is more like a robot template?

E.g.

defined_class	label	human_label	parent	location	xrefs	synonym	synonym_xrefs	taxon
2	VCCF:1000000	left atrium	left atrium (Human)	UBERON:0002079	heart chamber	https://en.wikipedia.org/wiki/Heart	Left atrium	FMA::7097

The Uberon DP would be a laterality one here.

[cmungall]

So we also have this

https://github.com/obophenotype/vccf-ontology/blob/main/src/templates/vessel_organ_crosswalk.tsv

I don't really get why we're dividing the axioms between two TSVs

[anitacaron]

The DOSDP is still in draft mode, and we need to discuss that in the meeting. The second template is different because it comes from a different source.