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Support for Quiver #4

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wjidea opened this issue Nov 30, 2016 · 2 comments
Open

Support for Quiver #4

wjidea opened this issue Nov 30, 2016 · 2 comments

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@wjidea
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wjidea commented Nov 30, 2016

Hi Hajime,

Just curious, is minialign alignment accurate enough for Quiver genomic consensus corrections? Or do you have any other suggestions on sequence consensus corrections?

Thanks,

JW
@ocxtal
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ocxtal commented Dec 1, 2016

Hi Jie,

I'm not sure but, the output alignment paths are (should be 😅) almost compatible with that of BWA-MEM and BLASR. So for now I think it is probably applicable to the Quiver algorithm...

However, I'm also interested in the issue. I've just started evaluating it and will check if there is significant differences in the result.

Thanks,

Hajime Suzuki

@wjidea
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wjidea commented Dec 2, 2016

Good to know.

Thanks,

Jie

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@wjidea @ocxtal