diff --git a/notebooks/09_mutation_analysis.ipynb b/notebooks/09_mutation_analysis.ipynb index a5f69491..e5a98308 100644 --- a/notebooks/09_mutation_analysis.ipynb +++ b/notebooks/09_mutation_analysis.ipynb @@ -60,13 +60,17 @@ "source": [ "# og_dir = '../data/generate_seqs_flexible/2023_04_17_205800/'\n", "og_dir = '../data/ensemble_mutation_effect_analysis/2023_07_15_192831/generate_species_templates'\n", + "# og_dir = '../data/ensemble_mutation_effect_analysis/2024_11_27_145142/generate_species_templates'\n", "\n", "fn_og = os.path.join(og_dir, 'circuit_stats.csv')\n", "# mut_dir = '../data/ensemble_mutation_effect_analysis/2023_05_16_174613/mutation_effect_on_interactions_signal'\n", "mut_dir = '../data/ensemble_mutation_effect_analysis/2023_07_17_105328/mutation_effect_on_interactions_signal'\n", + "# mut_dir = '../data/ensemble_mutation_effect_analysis/2024_11_27_145142/mutation_effect_on_interactions_signal'\n", "# fn_mut = '../data/ensemble_mutation_effect_analysis/2023_05_16_174613/summarise_simulation/tabulated_mutation_info.csv'\n", "fn_mut = '../data/ensemble_mutation_effect_analysis/2023_07_17_105328/summarise_simulation/tabulated_mutation_info.csv'\n", + "# fn_mut = '../data/ensemble_mutation_effect_analysis/2024_11_27_145142/summarise_simulation/tabulated_mutation_info.csv'\n", "fn_random_start = '../data/ensemble_mutation_effect_analysis/2023_06_05_164913/summarise_simulation/tabulated_mutation_info.csv'\n", + "# fn_random_start = '../data/ensemble_mutation_effect_analysis/2024_11_21_160955/summarise_simulation/tabulated_mutation_info.csv'\n", "\n", "data = pd.read_csv(fn_mut)\n", "data_rnd = pd.read_csv(fn_random_start)" @@ -1549,7 +1553,7 @@ ], "metadata": { "kernelspec": { - "display_name": "env_circuits", + "display_name": "Python 3", "language": "python", "name": "python3" },