From b9c63363ea9d6d85f349098c40ccce03acf5ef87 Mon Sep 17 00:00:00 2001 From: Josh Moore Date: Tue, 14 Mar 2023 11:33:06 +0100 Subject: [PATCH 1/2] Add CITATION.cff Created using https://citation-file-format.github.io/cff-initializer-javascript/#/ --- CITATION.cff | 110 +++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 110 insertions(+) create mode 100644 CITATION.cff diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 00000000..95a417fd --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,110 @@ +# This CITATION.cff file was generated with cffinit. +# Visit https://bit.ly/cffinit to generate yours today! + +cff-version: 1.2.0 +title: Nex-generation file format (NGFF) +message: >- + If you use this software, please cite it using the + metadata from this file. +type: software +authors: + - given-names: Josh + family-names: Moore + email: josh@openmicroscopy.org + affiliation: German BioImaging e.V. + orcid: 'https://orcid.org/0000-0003-4028-811X' + - given-names: Sébastien + family-names: Besson + email: sbesson@glencoesoftware.com + affiliation: 'Glencoe Software, Inc.' + orcid: 'https://orcid.org/0000-0001-8783-1429' + - given-names: Constantin + family-names: Pape + email: constantin.pape@informatik.uni-heidelberg.de + affiliation: 'Georg-August Universität Göttingen, Germany' + orcid: 'https://orcid.org/0000-0001-6562-7187' +identifiers: + - type: doi + value: 10.1038/s41592-021-01326-w + description: Original Nature Methods article (2021) + - type: doi + value: 10.1101/2023.02.17.528834v2 + description: OME-Zarr preprint (2023) +repository-code: 'https://github.com/ome/ngff' +url: 'https://ngff.openmicroscopy.org' +abstract: >- + A growing community is constructing a next-generation file + format (NGFF) for bioimaging to overcome problems of + scalability and heterogeneity. Organized by the Open + Microscopy Environment (OME), individuals and institutes + across diverse modalities facing these problems have + designed a format specification process (OME-NGFF) to + address these needs. Those community members have built + the format itself – OME-Zarr – along with tools and data + resources available today to increase FAIR access and + remove barriers in the scientific process. The current + momentum offers an opportunity to unify a key component of + the bioimaging domain — the file format that underlies so + many personal, institutional, and global data management + and analysis tasks. +keywords: + - FAIR + - community + - bioimaging + - data + - cloud + - format +license: CC-BY-4.0 +commit: c6d7d84f77959846ecdc9b65eecfa87bb6dc1f86 +version: 0.1.0 +date-released: '2020-11-20' +preferred-citation: + type: article + authors: + - given-names: "Josh" + family-names: "Moore" + orcid: "https://orcid.org/0000-0003-4028-811X" + - given-names: "Chris" + family-names: "Allan" + - given-names: "Sébastien" + family-names: "Besson" + orcid: "https://orcid.org/0000-0001-8783-1429" + - given-names: "Jean-Marie" + family-names: "Burel" + orcid: "https://orcid.org/0000-0002-1789-1861" + - given-names: "Erin" + family-names: "Diel" + orcid: "https://orcid.org/0000-0003-2526-3512" + - given-names: "David" + family-names: "Gault" + - given-names: "Kevin" + family-names: "Kozlowski" + - given-names: "Dominik" + family-names: "Lindner" + orcid: "https://orcid.org/0000-0001-8038-1250" + - given-names: "Melissa" + family-names: "Linkert" + - given-names: "Trevor" + family-names: "Manz" + orcid: "https://orcid.org/0000-0001-7694-5164" + - given-names: "Will" + family-names: "Moore" + orcid: "https://orcid.org/0000-0002-7264-8338" + - given-names: "Constantin" + family-names: "Pape" + orcid: "https://orcid.org/0000-0001-6562-7187" + - given-names: "Christian" + family-names: "Tischer" + orcid: "https://orcid.org/0000-0003-4105-1990" + - given-names: "Jason R." + family-names: "Swedlow" + orcid: "https://orcid.org/0000-0002-2198-1958" + doi: "10.1038/s41592-021-01326-w" + journal: "Nature Methods" + month: 11 + start: 1496 + end: 1498 + title: "OME-NGFF: a next-generation file format for expanding bioimaging data-access strategies" + issue: 12 + volume: 18 + year: 2021 From 9daf3a7ab7ae217605839f3f69477911cecced6e Mon Sep 17 00:00:00 2001 From: Josh Moore Date: Fri, 5 May 2023 18:09:47 +0200 Subject: [PATCH 2/2] Add fixes from Will --- CITATION.cff | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/CITATION.cff b/CITATION.cff index 95a417fd..fdd0b9c0 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -2,9 +2,9 @@ # Visit https://bit.ly/cffinit to generate yours today! cff-version: 1.2.0 -title: Nex-generation file format (NGFF) +title: Next-generation file format (NGFF) message: >- - If you use this software, please cite it using the + If you use this specification, please cite it using the metadata from this file. type: software authors: