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Custom Hierarchies #1432

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Custom Hierarchies #1432

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Commits on Nov 15, 2024

  1. Introduce SharedAttributableData

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  2. Introduce SharedAttributableData

    @franzpoeschel
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  3. JSON backend: Fail when trying to open non-existing groups

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  4. Insert CustomHierarchy class to Iteration

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  5. Help older compilers deal with this

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  6. Add vector variants of meshes/particlesPath

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  7. Move meshes and particles over to CustomHierarchies class

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  8. Move dirtyRecursive to CustomHierarchy

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  9. Move Iteration reading logic to CustomHierarchy

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  10. Move Iteration flushing logic to CustomHierarchy class

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  11. Support for custom datasets

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  12. Treat "meshes"/"particles" as normal subgroups 

    Introduction of iteration["meshes"].asContainerOf<Mesh>() as a more
explicit variant for iteration.meshes.
    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  13. Regex-based list of meshes/particlesPaths

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  14. More extended testing

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  15. Fix Python bindings without adding new functionality yet 

    Overload resolution
    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  16. Add simple Python bindings and an example

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  17. Replace Regexes with Globbing 

    TODO: Since meshes/particles can no longer be directly addressed with
this, maybe adapt the class hierarchy to disallow mixed groups that
contain meshes, particles, groups and datasets at the same time.

Only maybe though..
    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  18. Move .meshes and .particles back to Iteration class 

    The have their own meaning now and are no longer just carefully maintained
for backwards compatibility.
Instead, they are supposed to serve as a shortcut to all openPMD data
found further down the hierarchy.
    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  19. Some fixes in read error handling

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  20. More symmetric design for container types

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  21. Don't write unitSI in custom datasets

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  22. Discouraged support for custom datasets inside the particlesPath

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  23. Fix after rebase: dirtyRecursive

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  24. Fixes to the dirty/dirtyRecursive logic

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  25. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci @franzpoeschel
    pre-commit-ci[bot] authored and franzpoeschel committed Nov 15, 2024
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  26. Some cleanup in CustomHierarchies class

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  27. Use polymorphism for meshes/particlesPath in Python

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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  28. Remove hasMeshes / hasParticles logic

    @franzpoeschel
    franzpoeschel committed Nov 15, 2024
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Commits on Nov 19, 2024

  1. HDF5: Delete and re-create attribute when overwriting with diff. type 

    Should go into a separate bugfix PR soon, but I need it here atm.
    @franzpoeschel
    franzpoeschel committed Nov 19, 2024
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