From 51af8be317cccd4669c1ad8e20483a2aec6b84ec Mon Sep 17 00:00:00 2001
From: pfurio <pedrofurio@gmail.com>
Date: Fri, 21 Feb 2025 15:58:23 +0100
Subject: [PATCH] catalog: add missing CLINICAL resource to archive
 collections,#TASK-6445

---
 .../catalog/db/mongodb/AuthorizationMongoDBAdaptor.java       | 3 +++
 .../catalog/db/mongodb/ClinicalAnalysisMongoDBAdaptor.java    | 4 ++++
 2 files changed, 7 insertions(+)

diff --git a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/AuthorizationMongoDBAdaptor.java b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/AuthorizationMongoDBAdaptor.java
index ce8690d2c5..d160c9f6d6 100644
--- a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/AuthorizationMongoDBAdaptor.java
+++ b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/AuthorizationMongoDBAdaptor.java
@@ -1203,6 +1203,9 @@ private MongoDBCollection getArchiveCollection(Enums.Resource resource) throws C
                 return dbAdaptorFactory.getCatalogFamilyDBAdaptor().getArchiveFamilyCollection();
             case WORKFLOW:
                 return dbAdaptorFactory.getWorkflowDBAdaptor().getArchiveCollection();
+            case CLINICAL:
+            case CLINICAL_ANALYSIS:
+                return dbAdaptorFactory.getClinicalAnalysisDBAdaptor().getArchiveCollection();
             default:
                 throw new CatalogDBException("Unexpected resource '" + resource + "' parameter received.");
         }
diff --git a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/ClinicalAnalysisMongoDBAdaptor.java b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/ClinicalAnalysisMongoDBAdaptor.java
index 00fc2b1473..15a3a02cc2 100644
--- a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/ClinicalAnalysisMongoDBAdaptor.java
+++ b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/db/mongodb/ClinicalAnalysisMongoDBAdaptor.java
@@ -107,6 +107,10 @@ protected MongoDBCollection getCollection() {
         return clinicalCollection;
     }
 
+    public MongoDBCollection getArchiveCollection() {
+        return archiveClinicalCollection;
+    }
+
     static void fixCommentsForRemoval(ObjectMap parameters) {
         if (parameters.get(COMMENTS.key()) == null) {
             return;