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Ignacio edited this page Jan 20, 2014 · 28 revisions

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"import"/"export": return file formats

http://imedina:8080/eva/study/1000g,ESV/export?1000g=s1,s2&ESV=s1,s4 http://imedina:8080/opencga/rest/{storage/study}/public/1000g/1000g.vcf/export

Query params:

  • "filters": region, samples, CT, SNV/INDEL, ...
  • format: VCF, csv, ...
  • merge?

"queries by sample/study": returns objects (json/protobuf)

http://imedina:8080/opencga/rest/storage/public/1000g,ESV/query?1000g=s1,s2&ESV=s1,s2&region=3:444-6666

Query params:

  • "filters": region, samples?, CT, SNV/INDEL, ...
  • output type: json/protobuf

"queries by id": returns objects (json/protobuf)

http://imedina:8080/opencga/variation/rs666/fetch

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