Unrecognized function or variable 'TranslateSBML'.

[2132030]

model=readCbModel('e_coli_core.xml')
Unrecognized function or variable 'TranslateSBML'.

Error in readSBML (line 31)
modelSBML = TranslateSBML(fileName,0,0,[1 1]);

Error in readCbModel (line 211)
model = readSBML(fileName,defaultBound);

I got this error. How can solve?

[rmtfleming]

This is related to the COBRA.binary issue which we hope to fix today.

…

On Sun, 18 Feb 2024 at 14:06, 2132030 ***@***.***> wrote: model=readCbModel('e_coli_core.xml') Unrecognized function or variable 'TranslateSBML'. Error in readSBML (line 31) modelSBML = TranslateSBML(fileName,0,0,[1 1]); Error in readCbModel (line 211) model = readSBML(fileName,defaultBound); I got this error. How can solve? — Reply to this email directly, view it on GitHub <#2233>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAQMEOVEY5M55M67IG7U5FLYUIDFPAVCNFSM6AAAAABDOF7PLGVHI2DSMVQWIX3LMV43ASLTON2WKOZSGE2DCMBQGQYDSOI> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

-- -- Mr. Ronan MT Fleming B.V.M.S. Dip. Math. Ph.D. ---------------------------------------------------------------------------- Associate Professor, School of Medicine, University of Galway, Ireland. Coordinator of the Horizon Europe project "Reconstruction and Computational Modelling for Inherited Metabolic Diseases" (Recon4IMD <https://www.recon4imd.org/>) ---------------------------------------------------------------------------- Peer-reviewed publications: https://goo.gl/FZPG23 Mobile: +353 852 109 806 Github: @rmtfleming <https://github.com/rmtfleming> ----------------------------------------------------------------------------

[2132030]

ecoli= readCbModel('e_coli_core.xml')
Unrecognized function or variable 'TranslateSBML'.

Error in readSBML (line 31)
modelSBML = TranslateSBML(fileName,0,0,[1 1]);

Error in readCbModel (line 211)
model = readSBML(fileName,defaultBound);

I got same error again

[farid-zare]

Hi,
It is working now, can you please,

1. Update your cobratoolbox to the develop branch.
2. Make sure the model that you are trying to load exists in that directory and it's not the case of misspelling.