From bf78774a24694c0004ed9e19666db039e572317f Mon Sep 17 00:00:00 2001 From: Robrecht Cannoodt Date: Tue, 3 Sep 2024 06:54:00 +0200 Subject: [PATCH] fix numpy issues --- src/datasets/normalization/l1_sqrt/config.vsh.yaml | 2 +- src/tasks/denoising/metrics/mse/config.vsh.yaml | 1 + 2 files changed, 2 insertions(+), 1 deletion(-) diff --git a/src/datasets/normalization/l1_sqrt/config.vsh.yaml b/src/datasets/normalization/l1_sqrt/config.vsh.yaml index 0e3936f34c..212eadc968 100644 --- a/src/datasets/normalization/l1_sqrt/config.vsh.yaml +++ b/src/datasets/normalization/l1_sqrt/config.vsh.yaml @@ -21,7 +21,7 @@ platforms: - type: python packages: - scprep - - numpy + - numpy<2 - type: nextflow directives: label: [midtime, midmem, midcpu] diff --git a/src/tasks/denoising/metrics/mse/config.vsh.yaml b/src/tasks/denoising/metrics/mse/config.vsh.yaml index 8330a8de31..41a1f37d29 100644 --- a/src/tasks/denoising/metrics/mse/config.vsh.yaml +++ b/src/tasks/denoising/metrics/mse/config.vsh.yaml @@ -25,6 +25,7 @@ platforms: packages: - scikit-learn - scprep + - numpy<2 - type: nextflow directives: label: [midtime, highmem, midcpu]