From 37fde117354581948dc044dfd129755d1d1ab04b Mon Sep 17 00:00:00 2001 From: Robrecht Cannoodt Date: Sat, 7 Sep 2024 23:04:12 +0200 Subject: [PATCH] fix base images --- src/datasets/loaders/zenodo_spatial/config.vsh.yaml | 2 +- src/datasets/loaders/zenodo_spatial_slidetags/config.vsh.yaml | 2 +- .../spatially_variable_genes/methods/gpcounts/config.vsh.yaml | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/src/datasets/loaders/zenodo_spatial/config.vsh.yaml b/src/datasets/loaders/zenodo_spatial/config.vsh.yaml index e4204802e1..776b177481 100644 --- a/src/datasets/loaders/zenodo_spatial/config.vsh.yaml +++ b/src/datasets/loaders/zenodo_spatial/config.vsh.yaml @@ -83,5 +83,5 @@ functionality: platforms: - type: docker - image: ghcr.io/openproblems-bio/base_images/python:1.1.0 + image: openproblems/base_python:1.0.0 - type: nextflow diff --git a/src/datasets/loaders/zenodo_spatial_slidetags/config.vsh.yaml b/src/datasets/loaders/zenodo_spatial_slidetags/config.vsh.yaml index 8a6dfb189e..905be3514c 100644 --- a/src/datasets/loaders/zenodo_spatial_slidetags/config.vsh.yaml +++ b/src/datasets/loaders/zenodo_spatial_slidetags/config.vsh.yaml @@ -84,5 +84,5 @@ functionality: platforms: - type: docker - image: ghcr.io/openproblems-bio/base_images/python:1.1.0 + image: openproblems/base_python:1.0.0 - type: nextflow diff --git a/src/tasks/spatially_variable_genes/methods/gpcounts/config.vsh.yaml b/src/tasks/spatially_variable_genes/methods/gpcounts/config.vsh.yaml index 7104dc7a62..49f40476e1 100644 --- a/src/tasks/spatially_variable_genes/methods/gpcounts/config.vsh.yaml +++ b/src/tasks/spatially_variable_genes/methods/gpcounts/config.vsh.yaml @@ -31,7 +31,7 @@ functionality: platforms: - type: docker # image: python:3.9.16 - image: ghcr.io/openproblems-bio/base_images/tensorflow_nvidia:1.1.0 + image: openproblems/base_tensorflow_nvidia:1.0.0 setup: - type: apt packages: