diff --git a/src/gentropy/l2g.py b/src/gentropy/l2g.py index 9f75adaf4..dd1d7ed48 100644 --- a/src/gentropy/l2g.py +++ b/src/gentropy/l2g.py @@ -138,8 +138,8 @@ def __init__( gold_standard_curation_path (str | None): Path to the gold standard curation file variant_index_path (str | None): Path to the variant index gene_interactions_path (str | None): Path to the gene interactions dataset - gene_index_path (str | None = None): Path to the gene index - interval_path (str | None = None) : Path and source of interval input datasets + gene_index_path (str | None): Path to the gene index + interval_path (str | None) : Path and source of interval input datasets predictions_path (str | None): Path to the L2G predictions output dataset l2g_threshold (float | None): An optional threshold for the L2G score to filter predictions. A threshold of 0.05 is recommended. hf_hub_repo_id (str | None): Hugging Face Hub repository ID. If provided, the model will be uploaded to Hugging Face.