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    85 repositories

    • RIQAE-Java

      Public
      A basic project showing how to use the Java API for RIQAE
      Java
      •0•0•0•1•Updated Oct 12, 2020Oct 12, 2020

    • volviewer

      Public
      The volume viewer utility used inside of TIPL based on the Fiji plugin
      Java
      •5•0•0•0•Updated Nov 21, 2019Nov 21, 2019

    • pyqae

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•2•1•3•Updated Jun 28, 2018Jun 28, 2018

    • MaxIV_SummerSchool_2018

      Public
      The material for the Big Data and 3D analysis presentation for the MaxIV Summer School (https://www.maxiv.lu.se/2018-sr-summer-school_maxiv-chalmers/)
      Jupyter Notebook
      •
      Apache License 2.0
      •3•2•0•1•Updated May 28, 2018May 28, 2018

    • digits-docker-binder

      Public
      Running NVIDIA DIGITS in Binder by using a Custom Docker FIle
      deep-learningbinder-ready
      Python
      •31•2•0•1•Updated May 9, 2018May 9, 2018

    • pydiq

      Public
      Simple DICOM browser in Python
      Python
      •
      MIT License
      •13•0•0•0•Updated Dec 19, 2017Dec 19, 2017

    • christmas_special_2017

      Public
      Build your own Blockchain 🎄 PyData Zurich 🎄 Xmas special.
      Jupyter Notebook
      •9•0•0•0•Updated Dec 13, 2017Dec 13, 2017

    • SimpleITK

      Public
      SimpleITK: a simplified layer build on top of the Insight Toolkit (ITK), intended to facilitate its use in rapid prototyping, education and interpreted languages.
      C++
      •
      Apache License 2.0
      •203•0•0•0•Updated Oct 30, 2017Oct 30, 2017

    • progressive_growing_of_gans

      Public
      Python
      •
      Other
      •2•2•0•0•Updated Oct 30, 2017Oct 30, 2017

    • DSB2017

      Public
      Code for 2nd place solution to the 2017 National Data Science Bowl
      Python
      •156•0•0•0•Updated Oct 17, 2017Oct 17, 2017

    • meetup

      Public
      The PyData Zurich meetup
      Jupyter Notebook
      •16•0•0•0•Updated Oct 6, 2017Oct 6, 2017

    • pydicom

      Public
      Read, modify and write DICOM files with python code
      Python
      •
      Other
      •480•0•0•0•Updated Jul 18, 2017Jul 18, 2017

    • noscope

      Public
      A fork of the repository from the Dawn Group at Stanford
      computer-visiondeep-learningobject-detectionobject-detection-pipelinesvideo-analytics
      Python
      •122•0•0•0•Updated Jul 9, 2017Jul 9, 2017

    • klepto

      Public
      persistent caching to memory, disk, or database
      Python
      •
      Other
      •27•0•0•0•Updated Jul 7, 2017Jul 7, 2017

    • DLTK

      Public
      Deep Learning Toolkit for Medical Image Analysis
      Python
      •
      Apache License 2.0
      •405•1•0•0•Updated Jun 20, 2017Jun 20, 2017

    • Bone-Segmenter

      Public
      Bone segmentation in CT scans using Deep Convolutional Neural Networks
      dockertheanodeep-learningmedical-imagingslicermedical-image-processingbone
      Python
      •13•31•2•0•Updated May 30, 2017May 30, 2017

    • keras

      Public
      Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on TensorFlow or Theano.
      Python
      •
      Other
      •19k•0•0•0•Updated May 14, 2017May 14, 2017

    • BBP-Setup

      Public
      Files for getting started
      dockersparkdeep-learningpipeline
      Jupyter Notebook
      •1•1•5•0•Updated May 8, 2017May 8, 2017

    • lime

      Public
      Lime: Explaining the predictions of any machine learning classifier
      JavaScript
      •
      BSD 2-Clause "Simplified" License
      •1.8k•0•0•0•Updated May 4, 2017May 4, 2017

    • SimGAN

      Public
      Implementation of Apple's Learning from Simulated and Unsupervised Images through Adversarial Training
      Jupyter Notebook
      •
      MIT License
      •99•1•0•0•Updated May 2, 2017May 2, 2017

    • X

      Public
      X is a temporary name, but here lies RL
      machine-learningreinforcement-learningdeep-learningkeras-tutorialskeras-neural-networks
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•0•0•0•Updated Mar 6, 2017Mar 6, 2017

    • neuroglancer

      Public
      WebGL-based viewer for volumetric data
      TypeScript
      •
      Apache License 2.0
      •295•0•0•0•Updated Feb 27, 2017Feb 27, 2017

    • LungStageAuditor

      Public
      The audit tool for checking labels
      0•0•8•0•Updated Feb 17, 2017Feb 17, 2017

    • pyradiomics

      Public
      Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks.
      Python
      •
      Other
      •499•0•0•0•Updated Feb 13, 2017Feb 13, 2017

    • meta

      Public
      Webinterface to Apache Solr to make the PACS searchable
      Jupyter Notebook
      •2•0•0•0•Updated Feb 6, 2017Feb 6, 2017

    • LungStageAnnotator

      Public
      The documentation and support for the LungStageAnnotator tool
      annotations3d-slicer
      0•2•35•0•Updated Feb 2, 2017Feb 2, 2017

    • deepmedic

      Public
      Efficient Multi-Scale 3D Convolutional Neural Network for Brain Lesion Segmentation
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •342•1•0•0•Updated Dec 24, 2016Dec 24, 2016

    • ShinyTensorflowDocker

      Public
      A docker image for developing tensorflow-based Shiny applications with Keras
      1•0•0•0•Updated Nov 25, 2016Nov 25, 2016

    • mindcontrol

      Public
      MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:
      JavaScript
      •
      Other
      •25•0•0•0•Updated Nov 24, 2016Nov 24, 2016

    • pix2pix

      Public
      Image-to-image translation using conditional adversarial nets
      Lua
      •
      Other
      •1.7k•0•0•0•Updated Nov 23, 2016Nov 23, 2016