Repositories list

• ScottishLabData

  Public
  The SQL script for transferring regional Safe Haven data structure into the proposed structure for each Safe Haven, as well as R scripts for laboratory data harmonisation.

  R

  •

  MIT License

  •0•1•0•0•Updated Oct 10, 2024Oct 10, 2024

• TREEHOOSE

  Public
  DARE UK Sprint Project: Trusted Research Environment and Enclave for Hosting Open Original Science Exploration

  Python

  •

  Apache License 2.0

  •15•9•18•0•Updated Sep 2, 2024Sep 2, 2024

• treehoose-egress-app-backend

  Public
  Python

  •

  Apache License 2.0

  •2•0•3•0•Updated Mar 27, 2024Mar 27, 2024

• treehoose-egress-app-frontend

  Public
  JavaScript

  •

  Apache License 2.0

  •1•0•1•2•Updated Jan 10, 2024Jan 10, 2024

• treehoose-swb-customisations

  Public
  TREEHOOSE Service Workbench Customisations

  JavaScript

  •

  Apache License 2.0

  •1•0•0•1•Updated Sep 18, 2023Sep 18, 2023

• treehoose-ec2-builder

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jul 17, 2023Jul 17, 2023

• MOmicsML

  Public
  Multi-omics ML predictor code for Endocrine Hypertension

  R

  •

  MIT License

  •0•1•0•0•Updated Sep 26, 2022Sep 26, 2022

• GoDB

  Public
  Go

  •0•0•0•0•Updated Sep 7, 2022Sep 7, 2022

• TREEHOOSE-Enclave-PoC

  Public
  Proof of concept scripts for running within the secure enclave

  Python

  •

  MIT License

  •0•0•0•0•Updated May 13, 2022May 13, 2022

• bactmap

  Public
  A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

  Nextflow

  •

  MIT License

  •30•0•0•0•Updated Apr 14, 2022Apr 14, 2022

• bacass

  Public
  Simple bacterial assembly and annotation pipeline

  Nextflow

  •

  MIT License

  •41•0•0•0•Updated Apr 11, 2022Apr 11, 2022